RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SCN1AP35498 2009 aa9.38□□□□□ -0.91
CAPN3-208ENST00000397204 MYH11P35749 1972 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 DSPP15924 2871 aaKnown RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ATG2BQ96BY7 2078 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 C4orf47A7E2U8 309 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 DCLK1O15075 740 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 TADA3O75528 432 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 NFATC1O95644 943 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 PROS1P07225 676 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 FAM163BP0C2L3 166 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 PPP3CCP48454 512 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 DGKEP52429 567 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 KCNA1Q09470 495 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 MYO1EQ12965 1108 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 PSMD2Q13200 908 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ALCAMQ13740 583 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SF3A1Q15459 793 aaKnown RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 MAPRE1Q15691 268 aaKnown RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SOWAHAQ2M3V2 549 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 NAIF1Q69YI7 327 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SCN4BQ8IWT1 228 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ADGRG2Q8IZP9 1017 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ARL14EPQ8N8R7 260 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 TSTD1Q8NFU3 115 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SH3RF2Q8TEC5 729 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 USP33Q8TEY7 942 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 DNAJC19Q96DA6 116 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 EPSTI1Q96J88 318 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SPATA17Q96L03 361 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 PCMTD1Q96MG8 357 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 IKZF4Q9H2S9 585 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 OLFML3Q9NRN5 406 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 RBAKQ9NYW8 714 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 EHD2Q9NZN4 543 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 TRPM5Q9NZQ8 1165 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 MAGEC2Q9UBF1 373 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ARHGAP26Q9UNA1 814 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-208ENST00000397204 SNX9Q9Y5X1 595 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 WNT6Q9Y6F9 365 aa9.37□□□□□ -0.91
CAPN3-208ENST00000397204 DMXL2Q8TDJ6 3036 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 A0A0A0MRY4 1105 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 C2orf78A6NCI8 922 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 MYMKA6NI61 221 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 K7EQS6 105 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 SLC9A3R1O14745 358 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-208ENST00000397204 KIAA0391O15091 583 aaKnown RBP9.36□□□□□ -0.91
CAPN3-208ENST00000397204 AP1G2O75843 785 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 ALDH1A2O94788 518 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 KRT19P08727 400 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 CEACAM1P13688 526 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 CSRP1P21291 193 aaKnown RBP9.36□□□□□ -0.91
CAPN3-208ENST00000397204 GBP1P32455 592 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 MRPS21P82921 87 aaKnown RBP9.36□□□□□ -0.91
CAPN3-208ENST00000397204 USP4Q13107 963 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 KCNB1Q14721 858 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 SURF1Q15526 300 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 RRAGBQ5VZM2 374 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 PMS2CLQ68D20 193 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 TCEAL6Q6IPX3 200 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 PSAPL1Q6NUJ1 521 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 USP49Q70CQ1 688 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 OSTM1Q86WC4 334 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 RASSF3Q86WH2 238 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 ADGRF2Q8IZF7 708 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 STKLD1Q8NE28 680 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 TTC16Q8NEE8 873 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 ZSWIM2Q8NEG5 633 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 SAAL1Q96ER3 474 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 EDEM2Q9BV94 578 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 PDE11AQ9HCR9 933 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 SIX4Q9UIU6 781 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 CDH9Q9ULB4 789 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 MMP17Q9ULZ9 603 aa9.36□□□□□ -0.91
CAPN3-208ENST00000397204 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
CAPN3-208ENST00000397204 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-208ENST00000397204 ABCA7Q8IZY2 2146 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 LNP1A1A4G5 178 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 ZNF233A6NK53 670 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 ATP2C2O75185 946 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 GCNT3O95395 438 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 TMEM191BP0C7N4 346 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 LMO2P25791 158 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 GRIK1P39086 918 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 TXLNAP40222 546 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 OPRD1P41143 372 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 NOVA1P51513 510 aaKnown RBP9.35□□□□□ -0.91
CAPN3-208ENST00000397204 SLC7A9P82251 487 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 BYSLQ13895 437 aaKnown RBP9.35□□□□□ -0.91
CAPN3-208ENST00000397204 CRY1Q16526 586 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms