RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 ANGPT2O15123 496 aa16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 TFE3P19532 575 aaPredicted RBP16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 PTGER2P43116 358 aa16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 CDH8P55286 799 aa16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 CDK16Q00536 496 aa16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 MAPRE2Q15555 327 aa16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 R3HDM2Q9Y2K5 976 aaKnown RBP16.4■□□□□ 0.22
ATP2A3-205ENST00000397041 GLRA3O75311 464 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 PSMD10O75832 226 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 CYP1A2P05177 515 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 GFAPP14136 432 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 ITGA9Q13797 1035 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 EFCAB12Q6NXP0 572 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 KCNV1Q6PIU1 500 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 ACOT1Q86TX2 421 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 USP13Q92995 863 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 SNX5Q9Y5X3 404 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 C3P01024 1663 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 EEF2KO00418 725 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 PSMG1O95456 288 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 CLPTM1O96005 669 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 RPL7AP62424 266 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 PLOD1Q02809 727 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 SHC3Q92529 594 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 APOPT1Q96IL0 206 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 ZNF184Q99676 751 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 HSD17B14Q9BPX1 270 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 KLHL4Q9C0H6 718 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 BCAS3Q9H6U6 928 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 TGM2P21980 687 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 C16orf46Q6P387 395 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 GIPC2Q8TF65 315 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 FRMD8Q9BZ67 464 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 PLEKHA5Q9HAU0 1116 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 AFF2P51816 1311 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 PCSK7Q16549 785 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 GLRA4Q5JXX5 417 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 N4BP2L1Q5TBK1 243 aaPredicted RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 IPMKQ8NFU5 416 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 TFB1MQ8WVM0 346 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 GPRASP2Q96D09 838 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 SAR1AQ9NR31 198 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 DDX18Q9NVP1 670 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 PACSIN3Q9UKS6 424 aa16.39■□□□□ 0.21
ATP2A3-205ENST00000397041 FSCN2O14926 492 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 MT-CO1P00395 513 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 TAS2R40P59535 323 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 TBL3Q12788 808 aaKnown RBP16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 TBCCQ15814 346 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 PDK4Q16654 411 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 FAM131BQ86XD5 332 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 ANKRD27Q96NW4 1050 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 SOX13Q9UN79 622 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 BNIP3LO60238 219 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 SNX2O60749 519 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 MAP4P27816 1152 aaKnown RBP16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 CLCN3P51790 818 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 IRGCQ6NXR0 463 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 CES3Q6UWW8 571 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 VPS33BQ9H267 617 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 SNX13Q9Y5W8 968 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 PROCP04070 461 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 RARBP10826 455 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 PDK1Q15118 436 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 KATNAL2Q8IYT4 538 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 C12orf65Q9H3J6 166 aaKnown RBP16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
ATP2A3-205ENST00000397041 CYP3A7-CYP3A51PA0A087WV96 503 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 SDR42E2A6NKP2 422 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 CYP3A7P24462 503 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 LACTB2Q53H82 288 aaPredicted RBP16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 PDPK2PQ6A1A2 396 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 SLC7A14Q8TBB6 771 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 TNIP3Q96KP6 325 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 EPAS1Q99814 870 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 AP5M1Q9H0R1 490 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 FKBP6O75344 327 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 IER5Q5VY09 327 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 OTOAQ7RTW8 1153 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 ECHDC2Q86YB7 292 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 IFT43Q96FT9 208 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 ATXN2Q99700 1313 aaKnown RBP16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 CPA3P15088 417 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 NAMPTP43490 491 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 NFIL3Q16649 462 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 RDM1Q8NG50 284 aa16.37■□□□□ 0.21
ATP2A3-205ENST00000397041 LRRN4Q8WUT4 740 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms