RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ADCY1Q08828 1119 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 FAM102AQ5T9C2 384 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-209ENST00000397036 BEND5Q7L4P6 421 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 PHLDB2Q86SQ0 1253 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 SCUBE3Q8IX30 993 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 UBL4BQ8N7F7 174 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 IRGQQ8WZA9 623 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 CNPY3Q9BT09 278 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 GOLPH3Q9H4A6 298 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 ZMYND8Q9ULU4 1186 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-209ENST00000397036 SSX2IPQ9Y2D8 614 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 RWDD3Q9Y3V2 267 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 USP3Q9Y6I4 520 aa14.3□□□□□ -0.12
MCF2L-209ENST00000397036 GOLGA8SH3BPF8 625 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 TRIM66O15016 1216 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 SPOPO43791 374 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 HSF2BPO75031 334 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 PCK1P35558 622 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 GLUD2P49448 558 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 TUBB4BP68371 445 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 CREMQ03060 361 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 ITIH3Q06033 890 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 ZNF252P-AS1Q0IIN9 211 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 CLUL1Q15846 466 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 COL13A1Q5TAT6 717 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-209ENST00000397036 TPGS2Q68CL5 300 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 KIAA1841Q6NSI8 718 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 ZNF572Q7Z3I7 529 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-209ENST00000397036 CREG2Q8IUH2 290 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 CEP112Q8N8E3 955 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 JOSD2Q8TAC2 188 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 BTBD6Q96KE9 485 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 KCNK16Q96T55 309 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 METTL5Q9NRN9 209 aaKnown RBP14.29□□□□□ -0.12
MCF2L-209ENST00000397036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.29□□□□□ -0.12
MCF2L-209ENST00000397036 TMEM51Q9NW97 253 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 COMMD8Q9NX08 183 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 IL37Q9NZH6 218 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
MCF2L-209ENST00000397036 FAM170AA1A519 330 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 TNFRSF10BO14763 440 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 PSTPIP1O43586 416 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 NCK2O43639 380 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 LILRB3O75022 631 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 LCP1P13796 627 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 PDGFRAP16234 1089 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 PTPN9P43378 593 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 TKTL1P51854 596 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 CACNA2D1P54289 1103 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 OGDHQ02218 1023 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 CKAP4Q07065 602 aaKnown RBP14.28□□□□□ -0.12
MCF2L-209ENST00000397036 ADIGQ0VDE8 80 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 PSMD5Q16401 504 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 RSPO2Q6UXX9 243 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-209ENST00000397036 SIX6OS1Q8N1H7 587 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 RASGEF1CQ8N431 466 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 RXFP2Q8WXD0 754 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 RIN2Q8WYP3 895 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-209ENST00000397036 RPGRIP1Q96KN7 1286 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 SPATA17Q96L03 361 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
MCF2L-209ENST00000397036 TRIM62Q9BVG3 475 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 RXFP1Q9HBX9 757 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
MCF2L-209ENST00000397036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
MCF2L-209ENST00000397036 VWA8A3KMH1 1905 aa14.28□□□□□ -0.12
MCF2L-209ENST00000397036 MTMR11A4FU01 709 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 F8VP50 259 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 KCNK3O14649 394 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 TLL1O43897 1013 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 FGF18O76093 207 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 ABLIM3O94929 683 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 SLU7O95391 586 aaKnown RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 GJB6O95452 261 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 ZBED1O96006 694 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 OR4Q2P0C623 313 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 DESP17661 470 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 GPD1P21695 349 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 CYP2F1P24903 491 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 PSMA2P25787 234 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 BMPR1AP36894 532 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 DAOAP59103 153 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 RAB33AQ14088 237 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 CC2D1AQ6P1N0 951 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 POLNQ7Z5Q5 900 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 RHOT1Q8IXI2 618 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 COG1Q8WTW3 980 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 CENPIQ92674 756 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 NT5C3BQ969T7 300 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 B3GALT6Q96L58 329 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 SLC2A13Q96QE2 648 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 CLSTN3Q9BQT9 956 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms