RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MAP3K6O95382 1288 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 SERPINB4P48594 390 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 REPS2Q8NFH8 660 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 ASCC2Q9H1I8 757 aaPredicted RBP14.55□□□□□ -0.08
NUP98-204ENST00000397004 DHX33Q9H6R0 707 aaKnown RBP14.55□□□□□ -0.08
NUP98-204ENST00000397004 TMOD2Q9NZR1 351 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 POLIQ9UNA4 740 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 ERBB2P04626 1255 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 TROVE2P10155 538 aaKnown RBP eCLIP14.55□□□□□ -0.08
NUP98-204ENST00000397004 BASP1P80723 227 aaKnown RBP14.55□□□□□ -0.08
NUP98-204ENST00000397004 PIGHQ14442 188 aaPredicted RBP14.55□□□□□ -0.08
NUP98-204ENST00000397004 APOPT1Q96IL0 206 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 TWNKQ96RR1 684 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 ZCWPW1Q9H0M4 648 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 STX18Q9P2W9 335 aaKnown RBP14.55□□□□□ -0.08
NUP98-204ENST00000397004 TCEAL9Q9UHQ7 104 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 TTLL3Q9Y4R7 772 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 CENPFP49454 3210 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 WNT10BO00744 389 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 USP1O94782 785 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 GSRP00390 522 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 CDH8P55286 799 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 KCNJ11Q14654 390 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 PALM2Q8IXS6 379 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 IMPG2Q9BZV3 1241 aa14.55□□□□□ -0.08
NUP98-204ENST00000397004 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
NUP98-204ENST00000397004 K7ERI5 159 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 ABLIM1O14639 778 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 RFPL1O75677 317 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 TGDSO95455 350 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 PSMA2P25787 234 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 CAPSQ13938 189 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 KRT72Q14CN4 511 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 TEX44Q53QW1 395 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 ZBTB33Q86T24 672 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 ZC3H18Q86VM9 953 aaKnown RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 ACAP3Q96P50 834 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 SRPK1Q96SB4 655 aaKnown RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 PCYT2Q99447 389 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 EBF4Q9BQW3 602 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 STOML1Q9UBI4 398 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 MARCOQ9UEW3 520 aaPredicted RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 MT-ND3P03897 115 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 CALB1P05937 261 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 TBXAS1P24557 533 aaPredicted RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 MXRA7P84157 204 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 BST1Q10588 318 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 BMPR2Q13873 1038 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 FAXCQ5TGI0 409 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 ATP6V0A1Q93050 837 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 ZNF277Q9NRM2 450 aaPredicted RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 SLC9A2Q9UBY0 812 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 CEP128Q6ZU80 1094 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 POLNQ7Z5Q5 900 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 SLC25A41Q8N5S1 370 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 GPRASP2Q96D09 838 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 ZBED3Q96IU2 234 aaPredicted RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 ZNF778Q96MU6 729 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 MMP19Q99542 508 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 USP29Q9HBJ7 922 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 PAPOLBQ9NRJ5 636 aaKnown RBP14.54□□□□□ -0.08
NUP98-204ENST00000397004 AGTPBP1Q9UPW5 1226 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 LRCH1Q9Y2L9 728 aa14.54□□□□□ -0.08
NUP98-204ENST00000397004 H3BRJ5 948 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 AP1B1Q10567 949 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 DEFB132Q7Z7B7 95 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 CEP120Q8N960 986 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 CMASQ8NFW8 434 aaPredicted RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 RDM1Q8NG50 284 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 SYNCQ9H7C4 482 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 SPATS2LQ9NUQ6 558 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 PPM1HQ9ULR3 514 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 CCDC195A0A1B0GUA6 201 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 ENO1P06733 434 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 KITP10721 976 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 RBP3P10745 1247 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 CD1EP15812 388 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 KCNA3P22001 575 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 MIPP30301 263 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 IRGCQ6NXR0 463 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 CAND1Q86VP6 1230 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 CDR2LQ86X02 465 aaPredicted RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 TMEM192Q8IY95 271 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 TTLL6Q8N841 843 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 PPCSQ9HAB8 311 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 DDX56Q9NY93 547 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 SLC7A8Q9UHI5 535 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 MTO1Q9Y2Z2 717 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 ATP2A1O14983 1001 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 AHCYL1O43865 530 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 SMIM24O75264 130 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 PSAPP07602 524 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 KRT3P12035 628 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 IL4RP24394 825 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 EIF3EP60228 445 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 TRMT10BQ6PF06 316 aaKnown RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 ZCCHC23Q6ZST2 131 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms