RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 POLD3Q15054 466 aaPredicted RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PROSER1Q86XN7 944 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 FAM71DQ8N9W8 422 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CCSER1Q9C0I3 900 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 EPB41L4AQ9HCS5 686 aaPredicted RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 AGO2Q9UKV8 859 aaKnown RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 GRAP2O75791 330 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PRR29P0C7W0 189 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 THRAP10827 490 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ADAMTS12P58397 1594 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TMC2Q8TDI7 906 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 AIFM3Q96NN9 605 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 MCUBQ9NWR8 336 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PLEKHG1Q9ULL1 1385 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CHRM3P20309 590 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 SFNP31947 248 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TMEM132DQ14C87 1099 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PPIL6Q8IXY8 311 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CCDC126Q96EE4 140 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TAGLN3Q9UI15 199 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CHD4Q14839 1912 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 USP17L5A8MUK1 530 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 AP3M2P53677 418 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 MTM1Q13496 603 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TDRD5Q8NAT2 981 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 APEX2Q9UBZ4 518 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 LPIN1Q14693 890 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 RASSF6Q6ZTQ3 369 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 FIG4Q92562 907 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CINPQ9BW66 212 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 FAM25EA8MYX2 175 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 S100GP29377 79 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 ETFBP38117 255 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CAMK2GQ13555 558 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 SLC7A14Q8TBB6 771 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CRLS1Q9UJA2 301 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 LSM1O15116 133 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 SCGNO76038 276 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CCSAPQ6IQ19 270 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PGBD2Q6P3X8 592 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 SPATA33Q96N06 139 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 DKK3Q9UBP4 350 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 HEY2Q9UBP5 337 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PCCAP05165 728 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 LIFRP42702 1097 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PSMD4P55036 377 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 EIF4A1P60842 406 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 RAB2AP61019 212 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PPIDQ08752 370 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 OVGP1Q12889 678 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 RGS21Q2M5E4 152 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 FAM228AQ86W67 206 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CLYBLQ8N0X4 340 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 C8orf4Q9NR00 106 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 MYRFQ9Y2G1 1151 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CDK8P49336 464 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PRMT9Q6P2P2 845 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CCDC33Q8N5R6 958 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 VPS33AQ96AX1 596 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 KLF6Q99612 283 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 CCDC59Q9P031 241 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PHTF1Q9UMS5 762 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TRIP11Q15643 1979 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 ATP7AQ04656 1500 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 UBE2QL1A1L167 161 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 H3BN98 237 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 RAD51CO43502 376 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PDHBP11177 359 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PAX7P23759 505 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 IRAK1P51617 712 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 ZCCHC8Q6NZY4 707 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 ACAD9Q9H845 621 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 STX11O75558 287 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 PAICSP22234 425 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 DSG3P32926 999 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TAF5Q15542 800 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TCHHL1Q5QJ38 904 aaPredicted RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 JAMLQ86YT9 394 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 FAM9CQ8IZT9 166 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 B3GALNT2Q8NCR0 500 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 NMRK2Q9NPI5 230 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 TBC1D22BQ9NU19 505 aa10.66□□□□□ -0.7
COL4A4-201ENST00000396625 ABT1Q9ULW3 272 aaKnown RBP10.66□□□□□ -0.7
COL4A4-201ENST00000396625 KPNA5O15131 536 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 TTLL4Q14679 1199 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 RASA2Q15283 850 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 GPRASP2Q96D09 838 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 DSN1Q9H410 356 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 STK36Q9NRP7 1315 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 A0A1W2PQC6 194 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 VPS26AO75436 327 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 OR6B1O95007 311 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms