RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CENPIQ92674 756 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RBM12Q9NTZ6 932 aaKnown RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 CEP104O60308 925 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 VNN2O95498 520 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RABGGTBP53611 331 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RWDD2BP57060 319 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 SNX16P57768 344 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 TUBB4BP68371 445 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 ZNF211Q13398 564 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 TXNRD3NBQ6F5E7 133 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RHOT1Q8IXI2 618 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 CMTR2Q8IYT2 770 aaKnown RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 SCML4Q8N228 414 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 MED10Q9BTT4 135 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 PNPLA8Q9NP80 782 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 PGRMC1O00264 195 aaKnown RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 DYNC1I1O14576 645 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 LCP1P13796 627 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 NDUFV1P49821 464 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 EPHB4P54760 987 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RAB6CQ53S08 254 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RTP2Q5QGT7 225 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RXFP2Q8WXD0 754 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 B3GALT6Q96L58 329 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RAB6CQ9H0N0 254 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 ASNSD1Q9NWL6 643 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 C3orf70A6NLC5 250 aaPredicted RBP13.35□□□□□ -0.27
TRIM39-204ENST00000396548 TNFRSF10BO14763 440 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 GPD1P21695 349 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 PSMA2P25787 234 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 IL1R2P27930 398 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 CDR1P51861 262 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 ADIGQ0VDE8 80 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 SH3PXD2AQ5TCZ1 1133 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 POLNQ7Z5Q5 900 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 NT5C3BQ969T7 300 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 IGSF21Q96ID5 467 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 CHST7Q9NS84 486 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 OR4Q2P0C623 313 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 BDNFP23560 247 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 PCK1P35558 622 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 MRPS5P82675 430 aaKnown RBP13.35□□□□□ -0.27
TRIM39-204ENST00000396548 HTRA4P83105 476 aaPredicted RBP13.35□□□□□ -0.27
TRIM39-204ENST00000396548 ELF2Q15723 593 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 SLC2A13Q96QE2 648 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 CNPY3Q9BT09 278 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 EPC1Q9H2F5 836 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 CALCOCO1Q9P1Z2 691 aa13.35□□□□□ -0.27
TRIM39-204ENST00000396548 FYNP06241 537 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 PAFAH1B1P43034 410 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 PTPN9P43378 593 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 TSPY1Q01534 308 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 ELAVL2Q12926 359 aaKnown RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 TAZQ16635 292 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 OTUD1Q5VV17 481 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 NDRG1Q92597 394 aaKnown RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 BADQ92934 168 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 MRPL42Q9Y6G3 142 aaKnown RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 OR6C75A6NL08 312 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 GRAP2O75791 330 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 FGGP02679 453 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 ATP13A4Q4VNC1 1196 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 CCDC181Q5TID7 509 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 SLC39A11Q8N1S5 342 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 CFAP57Q96MR6 1250 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 DDX23Q9BUQ8 820 aaKnown RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 MYO16Q9Y6X6 1858 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 FSCN2O14926 492 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 TFE3P19532 575 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 PTPN7P35236 360 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 ARSEP51690 589 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 TKTL1P51854 596 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 SLC8A3P57103 927 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 DAOAP59103 153 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 RNASE9P60153 205 aaKnown RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 KLF1Q13351 362 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 PPIGQ13427 754 aaKnown RBP eCLIP13.34□□□□□ -0.279e-8■□□□□ 10.3
TRIM39-204ENST00000396548 C15orf59Q2T9L4 293 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 UBXN4Q92575 508 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 FUBP3Q96I24 572 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-204ENST00000396548 CNGB3Q9NQW8 809 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 USTQ9Y2C2 406 aa13.34□□□□□ -0.27
TRIM39-204ENST00000396548 TCRBV7S2A1N4TA0A589 114 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 ENDOD1O94919 500 aa13.33□□□□□ -0.28
TRIM39-204ENST00000396548 FBXO21O94952 628 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms