RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 EMC1Q8N766 993 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 KCTD6Q8NC69 237 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 FBXO36Q8NEA4 188 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 LRRC37BQ96QE4 947 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 PAFAH2Q99487 392 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 SYNCQ9H7C4 482 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 RPF1Q9H9Y2 349 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 TRIM33Q9UPN9 1127 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 INO80B-WBP1J3KQ70 363 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 CXCL11O14625 94 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 B4GALT5O43286 388 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 TMEM63AO94886 807 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 KRT19P08727 400 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 CXCL8P10145 99 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 CCND1P24385 295 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 MIPP30301 263 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 ALDH3A1P30838 453 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 CDH8P55286 799 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 PTPN11Q06124 597 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 EFTUD2Q15029 972 aaKnown RBP eCLIP16.71■□□□□ 0.279e-9■■■■■ 28.6
CCHCR1-202ENST00000396263 UNC45BQ8IWX7 931 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 C1orf127Q8N9H9 656 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 C10orf82Q8WW14 230 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 ERP27Q96DN0 273 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 INO80BQ9C086 356 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 RRAGCQ9HB90 399 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 CYLDQ9NQC7 956 aa16.71■□□□□ 0.27
CCHCR1-202ENST00000396263 NOP56O00567 594 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 MCF2LO15068 1137 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 TRUB2O95900 331 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 EIF3EP60228 445 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 MBTD1Q05BQ5 628 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 RFX6Q8HWS3 928 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 PDIK1LQ8N165 341 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 ZNF75CPQ92670 426 aaPredicted RBP16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 ALKBH8Q96BT7 664 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 NLRP4Q96MN2 994 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 RAB3IPQ96QF0 476 aaPredicted RBP16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 LRMDAQ9H2I8 198 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 RSAD1Q9HA92 442 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 ETNK1Q9HBU6 452 aa16.71■□□□□ 0.26
CCHCR1-202ENST00000396263 TCRBV7S3A2A0A539 114 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 SOCS7O14512 581 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 DIAPH2O60879 1101 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 CILPO75339 1184 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 RNF8O76064 485 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 MICAL2O94851 1124 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 PCK1P35558 622 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 PARP6Q2NL67 630 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 DCAKDQ8WVC6 231 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 TWNKQ96RR1 684 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 PCSK1NQ9UHG2 260 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 USP18Q9UMW8 372 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 STK38LQ9Y2H1 464 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 TM9SF1O15321 606 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 NFICP08651 508 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 FGFR1P11362 822 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 SLC26A2P50443 739 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 RNASELQ05823 741 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 THEMIS2Q5TEJ8 643 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 OTOAQ7RTW8 1153 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 PALM2Q8IXS6 379 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 CXorf38Q8TB03 319 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 MPHOSPH6Q99547 160 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 ELOVL4Q9GZR5 314 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 ASCC2Q9H1I8 757 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 SMYD3Q9H7B4 428 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 ASNSD1Q9NWL6 643 aa16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 XPO7Q9UIA9 1087 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-202ENST00000396263 EVPLQ92817 2033 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 A8MUI8 341 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 WFS1O76024 890 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 ENDOD1O94919 500 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 GJB1P08034 283 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 RBP3P10745 1247 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 GPD2P43304 727 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 DPYSL3Q14195 570 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 TMEM132AQ24JP5 1023 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 VSIG1Q86XK7 387 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 ZNF276Q8N554 614 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 FAM71DQ8N9W8 422 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 ZNF398Q8TD17 642 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 INPP5DQ92835 1189 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 TMEM176AQ96HP8 235 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 FGD4Q96M96 766 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 YIPF3Q9GZM5 350 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 CYP3A43Q9HB55 503 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 HMGXB4Q9UGU5 601 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 HMGCRP04035 888 aa16.69■□□□□ 0.26
CCHCR1-202ENST00000396263 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms