RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC6A3Q01959 620 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ACTN3Q08043 901 aaPredicted RBP17.56■□□□□ 0.4
NUP50-202ENST00000396096 PDIA2Q13087 525 aaKnown RBP17.56■□□□□ 0.4
NUP50-202ENST00000396096 CBLBQ13191 982 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 MPP2Q14168 576 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 DPYSL3Q14195 570 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 PDK2Q15119 407 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CCDC14Q49A88 953 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 SH3PXD2AQ5TCZ1 1133 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 PMF1Q6P1K2 205 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ZDHHC17Q8IUH5 632 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 UNC45BQ8IWX7 931 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CCDC13Q8IYE1 715 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 PIWIL1Q96J94 861 aaKnown RBP17.56■□□□□ 0.4
NUP50-202ENST00000396096 OSBPL7Q9BZF2 842 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 KDM4CQ9H3R0 1056 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CDHR5Q9HBB8 845 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 TUBGCP4Q9UGJ1 667 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 SLC24A2Q9UI40 661 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 PRPSAP2O60256 369 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 GHRP10912 638 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CYP2C9P11712 490 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 TSHRP16473 764 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 STIP1P31948 543 aaKnown RBP17.56■□□□□ 0.4
NUP50-202ENST00000396096 IFNAR2P48551 515 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 SLC18A1P54219 525 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CDH6P55285 790 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 BOLA3Q53S33 107 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 MORN1Q5T089 497 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 C9orf57Q5W0N0 161 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ARHGEF18Q6ZSZ5 1173 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ACOT1Q86TX2 421 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 TRABD2AQ86V40 505 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 SESTD1Q86VW0 696 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ZBED8Q8IZ13 594 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 ANKS4BQ8N8V4 417 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CCT6BQ92526 530 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 KHSRPQ92945 711 aaKnown RBP eCLIP17.56■□□□□ 0.41e-7■□□□□ 8.2
NUP50-202ENST00000396096 TBCBQ99426 244 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 CALN1Q9BXU9 219 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 KCNK9Q9NPC2 374 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.56■□□□□ 0.4
NUP50-202ENST00000396096 SAMD15Q9P1V8 674 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 TBK1Q9UHD2 729 aa17.56■□□□□ 0.4
NUP50-202ENST00000396096 UBQLN1Q9UMX0 589 aaKnown RBP17.56■□□□□ 0.4
NUP50-202ENST00000396096 GOLGA6L7A0A1B0GV03 622 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 ZNF487B1APH4 448 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 DYNC1LI2O43237 492 aaPredicted RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 CAPN15O75808 1086 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 OAS1P00973 400 aaKnown RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 VIMP08670 466 aaKnown RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 RBP3P10745 1247 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 SCNN1AP37088 669 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 TMEM62Q0P6H9 643 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 TMED2Q15363 201 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 C15orf59Q2T9L4 293 aaPredicted RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 TTC31Q49AM3 519 aaPredicted RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 XKR4Q5GH76 650 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 EFHC2Q5JST6 749 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 ANKRD22Q5VYY1 191 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 PPP1R21Q6ZMI0 780 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 MAP7D3Q8IWC1 876 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 SRRM1Q8IYB3 904 aaKnown RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 SPATA18Q8TC71 538 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 DYDC1Q8WWB3 177 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 RNF157Q96PX1 679 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 OSMRQ99650 979 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 MAK16Q9BXY0 300 aaKnown RBP17.55■□□□□ 0.4
NUP50-202ENST00000396096 SENP1Q9P0U3 644 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 HESX1Q9UBX0 185 aa17.55■□□□□ 0.4
NUP50-202ENST00000396096 FOXO6A8MYZ6 492 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 RASA4BC9J798 803 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 HAS3O00219 553 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 PIRO00625 290 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 RASA4O43374 803 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 RECQL4O94761 1208 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 CD4P01730 458 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 RPL34P49207 117 aaKnown RBP17.54■□□□□ 0.4
NUP50-202ENST00000396096 RGS7P49802 495 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 ROR1Q01973 937 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 MMRN1Q13201 1228 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 MFSD10Q14728 455 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 LRRC14Q15048 493 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 SOWAHAQ2M3V2 549 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 C18orf25Q96B23 403 aaPredicted RBP17.54■□□□□ 0.4
NUP50-202ENST00000396096 SGSM3Q96HU1 749 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 C10orf88Q9H8K7 445 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 VPS37BQ9H9H4 285 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 CYLDQ9NQC7 956 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 NKIRAS1Q9NYS0 192 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 CLUHO75153 1309 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 CCT8L1PA6NM43 557 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 PRPF4O43172 522 aaKnown RBP eCLIP17.54■□□□□ 0.4
NUP50-202ENST00000396096 GABBR2O75899 941 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 SDC4P31431 198 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 PHBP35232 272 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 GPX6P59796 221 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms