RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ATP11AP98196 1134 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 P3H1Q32P28 736 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 ANKRD52Q8NB46 1076 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 HHIPL1Q96JK4 782 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 CALN1Q9BXU9 219 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 CDC42EP4Q9H3Q1 356 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 ELNP15502 786 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 SDC4P31431 198 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 OTUD4Q01804 1114 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 OASLQ15646 514 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 KCNA10Q16322 511 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 RAB6CQ53S08 254 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 SLC2A14Q8TDB8 520 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 STK32AQ8WU08 396 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 TNIP3Q96KP6 325 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 NCAPGQ9BPX3 1015 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 DNAH12Q6ZR08 3092 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 DESP17661 470 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 THPOP40225 353 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 ARSEP51690 589 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 TAZQ16635 292 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 TRMT10CQ7L0Y3 403 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 TOP6BLQ8N6T0 577 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 SMC1BQ8NDV3 1235 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 ACTL9Q8TC94 416 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 LPPQ93052 612 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 NKD2Q969F2 451 aaPredicted RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 NGRNQ9NPE2 291 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 SLC38A7Q9NVC3 462 aa12.72□□□□□ -0.37
ITGB1-202ENST00000396033 SAE1Q9UBE0 346 aaPredicted RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 DRG1Q9Y295 367 aaKnown RBP12.72□□□□□ -0.37
ITGB1-202ENST00000396033 SMIM23A6NLE4 172 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 SGK1O00141 431 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 DPYSL4O14531 572 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 CYB561D2O14569 222 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 ZSCAN5DPP0CG00 497 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 CDH6P55285 790 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 MGAT3Q09327 533 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 GAD1Q99259 594 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 TMEM121Q9BTD3 319 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 CHST12Q9NRB3 414 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 ITGAVP06756 1048 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 LCP1P13796 627 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 ETS1P14921 441 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 WARSP23381 471 aaKnown RBP12.71□□□□□ -0.37
ITGB1-202ENST00000396033 NKX3-2P78367 333 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 CAP1Q01518 475 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 SCYL2Q6P3W7 929 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 SLC35B2Q8TB61 432 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 FAM172AQ8WUF8 416 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 DDX23Q9BUQ8 820 aaKnown RBP12.71□□□□□ -0.37
ITGB1-202ENST00000396033 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
ITGB1-202ENST00000396033 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
ITGB1-202ENST00000396033 GPR182O15218 404 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 AOC2O75106 756 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 GABBR2O75899 941 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 ACSL3O95573 720 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 IFNB1P01574 187 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 RPLP2P05387 115 aaKnown RBP12.71□□□□□ -0.38
ITGB1-202ENST00000396033 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.38
ITGB1-202ENST00000396033 PTGISQ16647 500 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.38
ITGB1-202ENST00000396033 FRMD8P1Q9BZ68 369 aaPredicted RBP12.71□□□□□ -0.38
ITGB1-202ENST00000396033 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.38
ITGB1-202ENST00000396033 RSAD1Q9HA92 442 aa12.71□□□□□ -0.38
ITGB1-202ENST00000396033 TLDC2A0PJX2 215 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 CAND2O75155 1236 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 GPS1Q13098 491 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 KRT81Q14533 505 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 CYP4V2Q6ZWL3 525 aaPredicted RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 ARFGAP2Q8N6H7 521 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 CLEC4CQ8WTT0 213 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 PWWP2AQ96N64 755 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 MAK16Q9BXY0 300 aaKnown RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 AGO3Q9H9G7 860 aaKnown RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 DNALI1O14645 258 aaPredicted RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 THP07101 528 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 IRAK1P51617 712 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 MAGOHP61326 146 aaKnown RBP12.7□□□□□ -0.38
ITGB1-202ENST00000396033 NOGQ13253 232 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 WSCD1Q658N2 575 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms