RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CIR1Q86X95 450 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 FBXO16Q8IX29 292 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 RAVER1Q8IY67 606 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 CMTR2Q8IYT2 770 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 SYNPOQ8N3V7 929 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 C7orf31Q8N865 590 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 DVL3Q92997 716 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF689Q96CS4 500 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 AJUBAQ96IF1 538 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 RIC8BQ9NVN3 520 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 PUF60Q9UHX1 559 aaKnown RBP6.27□□□□□ -1.41
AP3S1-202ENST00000395548 TMX2Q9Y320 296 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 RIPK3Q9Y572 518 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ATP23Q9Y6H3 246 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 ITPR3Q14573 2671 aa6.27□□□□□ -1.41
AP3S1-202ENST00000395548 TCRBV5S4A2TA0A5A2 114 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 ALG1L2C9J202 215 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 C1QTNF3-AMACRE9PGA6 284 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 F5H6K3 240 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 TSPAN6O43657 245 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 PDE6AP16499 860 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF20P17024 532 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 PTPN1P18031 435 aaKnown RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 THPOP40225 353 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 CDKN1CP49918 316 aaPredicted RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 EPHB1P54762 984 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 CNTN2Q02246 1040 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 CALD1Q05682 793 aaKnown RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 PTPN14Q15678 1187 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 TRIM71Q2Q1W2 868 aaKnown RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 C2orf27AQ580R0 203 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 KIAA1755Q5JYT7 1200 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 TMEM179Q6ZVK1 233 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 REXO1L1PQ8IX06 675 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF384Q8TF68 577 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 THAP3Q8WTV1 239 aaPredicted RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 SCYL1Q96KG9 808 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 EXOC2Q96KP1 924 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 KATNAL1Q9BW62 490 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 PRMT8Q9NR22 394 aaPredicted RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 FBXO28Q9NVF7 368 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 AATFQ9NY61 560 aaKnown RBP eCLIP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 ARHGAP28Q9P2N2 729 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 PLAAQ9Y263 795 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
AP3S1-202ENST00000395548 SIPA1L1O43166 1804 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 ASXL3Q9C0F0 2248 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 LAMA1P25391 3075 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 MCM3APO60318 1980 aa6.26□□□□□ -1.41
AP3S1-202ENST00000395548 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 H0Y626 953 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 ALDH1L1O75891 902 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 TRIM16O95361 564 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 MYL1P05976 194 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SRGAP2CP0DJJ0 459 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 PYGMP11217 842 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 CSRP1P21291 193 aaKnown RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 DHX8Q14562 1220 aaKnown RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 PPP2R5BQ15173 497 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SF3A2Q15428 464 aaKnown RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 NFE2Q16621 373 aaPredicted RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 FIGNQ5HY92 759 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 ZBTB41Q5SVQ8 909 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 RARS2Q5T160 578 aaKnown RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 BEND3Q5T5X7 828 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 G2E3Q7L622 706 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 RASGRP2Q7LDG7 609 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 ZC3H7AQ8IWR0 971 aaKnown RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 CPXCR1Q8N123 301 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 TMTC2Q8N394 836 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SLC44A3Q8N4M1 653 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SAMD3Q8N6K7 520 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 C8orf58Q8NAV2 365 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 CHAC2Q8WUX2 184 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 KISS1RQ969F8 398 aaPredicted RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 NELL2Q99435 816 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SLF1Q9BQI6 1058 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 TACO1Q9BSH4 297 aaKnown RBP6.25□□□□□ -1.41
AP3S1-202ENST00000395548 ACAD9Q9H845 621 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SEC61A2Q9H9S3 476 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 SLC39A2Q9NP94 309 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 ST6GALNAC2Q9UJ37 374 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 CDH22Q9UJ99 828 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 PCDHA9Q9Y5H5 950 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 C2CD3Q4AC94 2353 aa6.25□□□□□ -1.41
AP3S1-202ENST00000395548 FAM90A27PA6NNH2 459 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 EYA2O00167 538 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 ASMTLO95671 621 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 CRTAMO95727 393 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 IL18BPO95998 194 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 AMY2AP04746 511 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 ZNF853P0CG23 659 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 KRT15P19012 456 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 AMY2BP19961 511 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 CASTP20810 708 aaKnown RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 SHMT1P34896 483 aa6.24□□□□□ -1.41
AP3S1-202ENST00000395548 RPS9P46781 194 aaKnown RBP6.24□□□□□ -1.41
AP3S1-202ENST00000395548 OAZ1P54368 228 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms