RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 RNF8O76064 485 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 RECQL4O94761 1208 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 ENDOD1O94919 500 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 GPD1P21695 349 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 ELF1P32519 619 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 PCK1P35558 622 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 MORF4L2Q15014 288 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 SOWAHAQ2M3V2 549 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 HP1BP3Q5SSJ5 553 aaPredicted RBP14.62□□□□□ -0.07
SNCA-204ENST00000394989 CST9Q5W186 159 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 OR6B2Q6IFH4 312 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 CYP4F22Q6NT55 531 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 OLFML1Q6UWY5 402 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 PRCCQ92733 491 aaPredicted RBP14.62□□□□□ -0.07
SNCA-204ENST00000394989 CFAP57Q96MR6 1250 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
SNCA-204ENST00000394989 DPEP3Q9H4B8 488 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 SAYSD1Q9NPB0 183 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 HAUS2Q9NVX0 235 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 ATXN2Q99700 1313 aaKnown RBP14.61□□□□□ -0.07
SNCA-204ENST00000394989 GCAP28676 217 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 TAOK1Q7L7X3 1001 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 TTC39CQ8N584 583 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 SLC35F5Q8WV83 523 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 CHMP6Q96FZ7 201 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 CNPY3Q9BT09 278 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 FOXP3Q9BZS1 431 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 INTS9Q9NV88 658 aaKnown RBP14.61□□□□□ -0.07
SNCA-204ENST00000394989 ASNSD1Q9NWL6 643 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 IGF2BP3O00425 579 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNCA-204ENST00000394989 TREHO43280 583 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 PDGFRAP16234 1089 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 NRLP54845 237 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 MAP2K5Q13163 448 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 MFSD10Q14728 455 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 CCDC14Q49A88 953 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 C9orf57Q5W0N0 161 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 CALN1Q9BXU9 219 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 SLC40A1Q9NP59 571 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNCA-204ENST00000394989 TBK1Q9UHD2 729 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 LGALS13Q9UHV8 139 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 NAALADL1Q9UQQ1 740 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 HTTP42858 3142 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 BANF1O75531 89 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 MPP2Q14168 576 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 CDO1Q16878 200 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 ANKRD22Q5VYY1 191 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 UNC45BQ8IWX7 931 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 SCUBE3Q8IX30 993 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 APOL6Q9BWW8 343 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 B3GNT5Q9BYG0 378 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
SNCA-204ENST00000394989 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.61□□□□□ -0.07
SNCA-204ENST00000394989 APOC4-APOC2K7ER74 178 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 HAS3O00219 553 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 CHUKO15111 745 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 SPTLC1O15269 473 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 APOC2P02655 101 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 ABHD2P08910 425 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 CLNS1AP54105 237 aaKnown RBP14.6□□□□□ -0.07
SNCA-204ENST00000394989 CCDC121Q6ZUS5 278 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 RFX6Q8HWS3 928 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 KBTBD7Q8WVZ9 684 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 CPT1BQ92523 772 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 SEC16BQ96JE7 1060 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 SLC4A5Q9BY07 1137 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 CCDC134Q9H6E4 229 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 KLK14Q9P0G3 267 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 SHOC2Q9UQ13 582 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 TMEM120BA0PK00 339 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 GOLGA8MH3BSY2 632 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
SNCA-204ENST00000394989 YARSP54577 528 aaKnown RBP14.6□□□□□ -0.07
SNCA-204ENST00000394989 CDC42EP1Q00587 391 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 SNX17Q15036 470 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 FAM182AQ5T1J6 154 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 ZNF618Q5T7W0 954 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 NPNTQ6UXI9 565 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 TMEM110Q86TL2 294 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 SPATS2Q86XZ4 545 aaKnown RBP14.6□□□□□ -0.07
SNCA-204ENST00000394989 TTC13Q8NBP0 860 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 GGA2Q9UJY4 613 aa14.6□□□□□ -0.07
SNCA-204ENST00000394989 PAPSS1O43252 624 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 FGFR1P11362 822 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 IL4RP24394 825 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 RPL22P35268 128 aaKnown RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 PEX19P40855 299 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 ATP11AP98196 1134 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 BEX3Q00994 111 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 DPYSL3Q14195 570 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 LRRC14Q15048 493 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 UBXN11Q5T124 520 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 NAIF1Q69YI7 327 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 BEST2Q8NFU1 509 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 PIN4Q9Y237 131 aaKnown RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 SMIM28A0A1B0GU29 152 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 TCRBV7S3A2A0A539 114 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 PIRO00625 290 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms