RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 BSDC1Q9NW68 430 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 WBP11Q9Y2W2 641 aaKnown RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 EIF3HO15372 352 aaKnown RBP eCLIP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 STX7O15400 261 aaKnown RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 PDHA2P29803 388 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SLC29A2Q14542 456 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 FOXR1Q6PIV2 292 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 REXO1L1PQ8IX06 675 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 RNF148Q8N7C7 305 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 PIGBQ92521 554 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 EXO5Q9H790 373 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 C10orf88Q9H8K7 445 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 LYVE1Q9Y5Y7 322 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 SNRPAP09012 282 aaKnown RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 TALDO1P37837 337 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 TDRD10Q5VZ19 366 aaKnown RBP12.66□□□□□ -0.38
SIN3A-202ENST00000394947 FAM45BPQ6NSW5 357 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 RIPOR1Q6ZS17 1223 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 PCDHA10Q9Y5I2 948 aa12.66□□□□□ -0.38
SIN3A-202ENST00000394947 TRAPPC8Q9Y2L5 1435 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 FAM25EA8MYX2 175 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 PSMD3O43242 534 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SOAT2O75908 522 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 CLTBP09497 229 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 LSP1P33241 339 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■□□ 18.5
SIN3A-202ENST00000394947 BAATQ14032 418 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 KCNB1Q14721 858 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 POM121L1PQ3SYA9 428 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SPPL2AQ8TCT8 520 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 C19orf60Q96EN9 201 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ZNF512BQ96KM6 892 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 RPRD1AQ96P16 312 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 PHTF1Q9UMS5 762 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SMG5Q9UPR3 1016 aaKnown RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 GRIK3Q13003 919 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 CIPCQ9C0C6 399 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 RIBC2Q9H4K1 309 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 MIEF1Q9NQG6 463 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 H3BN98 237 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SLC2A4P14672 509 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SRSF11Q05519 484 aaKnown RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 CSHL1Q14406 222 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SNX17Q15036 470 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ATP6AP1LQ52LC2 224 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 DENND1BQ6P3S1 775 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 FAM45AQ8TCE6 357 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 MINPP1Q9UNW1 487 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SH3GLB1Q9Y371 365 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SKIV2L2P42285 1042 aaKnown RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 CCT3P49368 545 aaKnown RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ZNF177Q13360 481 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 C11orf63Q6NUN7 778 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 ZBTB46Q86UZ6 589 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 CELF1Q92879 486 aaKnown RBP12.65□□□□□ -0.38
SIN3A-202ENST00000394947 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SNX12Q9UMY4 172 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 DYRK1BQ9Y463 629 aa12.65□□□□□ -0.38
SIN3A-202ENST00000394947 SMIM31A0A1B0GVY4 71 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 PCP4L1A6NKN8 68 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 VPS26AO75436 327 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 PDHBP11177 359 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 RHAGQ02094 409 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 FMR1NBQ8N0W7 255 aaPredicted RBP12.65□□□□□ -0.39
SIN3A-202ENST00000394947 TMC2Q8TDI7 906 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 CASP10Q92851 521 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 CLEC4MQ9H2X3 399 aaPredicted RBP12.65□□□□□ -0.39
SIN3A-202ENST00000394947 DCDC2Q9UHG0 476 aa12.65□□□□□ -0.39
SIN3A-202ENST00000394947 CYP4F2P78329 520 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 CYP4F3Q08477 520 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 NOD2Q9HC29 1040 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 THPOP40225 353 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 PTK6Q13882 451 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 ATF7IP2Q5U623 682 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
SIN3A-202ENST00000394947 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
SIN3A-202ENST00000394947 AP3D1O14617 1153 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
SIN3A-202ENST00000394947 VHLP40337 213 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
SIN3A-202ENST00000394947 CHRNB3Q05901 458 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 FAM83EQ2M2I3 478 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 MTSS1LQ765P7 747 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 CYP4Z1Q86W10 505 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 JAMLQ86YT9 394 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 PIGKQ92643 395 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 OSBPL8Q9BZF1 889 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
SIN3A-202ENST00000394947 HS6ST1O60243 411 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms