RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SGSM1Q2NKQ1 1148 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 C4orf50Q6ZRC1 276 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 THNSL1Q8IYQ7 743 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 PDIK1LQ8N165 341 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 PTCD3Q96EY7 689 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 PRR11Q96HE9 360 aaPredicted RBP19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 MS4A4AQ96JQ5 239 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 TRIM55Q9BYV6 548 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 SPATC1LQ9H0A9 340 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 A6NHS1 94 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 EIF4E1BA6NMX2 242 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 LPXNO60711 386 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 MT-ND3P03897 115 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 DHRS4L1P0CG22 281 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 NEK3P51956 506 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 NRLP54845 237 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 HADHQ16836 314 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 CMPK2Q5EBM0 449 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 ANO7Q6IWH7 933 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 ZPBP2Q6X784 338 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 TEX9Q8N6V9 391 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 FAM71DQ8N9W8 422 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 SERAC1Q96JX3 654 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 OSBPL1AQ9BXW6 950 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 KCNK13Q9HB14 408 aa19.17■□□□□ 0.66
PCDHA1-202ENST00000394633 CCDC189A1A4V9 331 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 CFAP69A5D8W1 941 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 TSHRP16473 764 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 ATP6V1C1P21283 382 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 ETV4P43268 484 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 ASPAP45381 313 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 BASP1P80723 227 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 FSTL1Q12841 308 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 KHDC1Q4VXA5 237 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 CDCA2Q69YH5 1023 aaPredicted RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 RFX6Q8HWS3 928 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 EMC1Q8N766 993 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 SKA1Q96BD8 255 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 DCLRE1BQ9H816 532 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 SLC24A3Q9HC58 644 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 CCDC22O60826 627 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 ELK3P41970 407 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 ARFIP2P53365 341 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 EIF3EP60228 445 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 PSMC1P62191 440 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 PTK7Q13308 1070 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 DPYSL3Q14195 570 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 TAF5Q15542 800 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 TARBP2Q15633 366 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 DUOXA2Q1HG44 320 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 FASTKD5Q7L8L6 764 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 CHSY1Q86X52 802 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 FNIP1Q8TF40 1166 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 CYTH2Q99418 400 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 BTBD10Q9BSF8 475 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 TCHPQ9BT92 498 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 METTL5Q9NRN9 209 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 RBPJLQ9UBG7 517 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 PCSK1NQ9UHG2 260 aa19.16■□□□□ 0.66
PCDHA1-202ENST00000394633 KAT6AQ92794 2004 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 MSCO60682 206 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 LMNAP02545 664 aaKnown RBP19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 SERPINB3P29508 390 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 RFC5P40937 340 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 YWHAEP62258 255 aaKnown RBP19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 TRPC3Q13507 836 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 PRKD1Q15139 912 aaPredicted RBP19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 ZNF699Q32M78 642 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 Q3C1V9 767 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 DSTYKQ6XUX3 929 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 SH2D5Q6ZV89 423 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 C2orf69Q8N8R5 385 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 APOPT1Q96IL0 206 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 PCYT2Q99447 389 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 TMEM120AQ9BXJ8 343 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 XYLT2Q9H1B5 865 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 ZFATQ9P243 1243 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 POLIQ9UNA4 740 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 IGKV6D-21A0A0A0MT36 114 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 IQANK1A0A1B0GTG1 560 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 APOC4-APOC2K7ER74 178 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 SMAPO00193 183 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 GSC2O15499 205 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 DNAJC6O75061 913 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 TOM1L1O75674 476 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 APOC2P02655 101 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 CD19P15391 556 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 POLR2BP30876 1174 aaKnown RBP19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 FKBP1BP68106 108 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 CDK16Q00536 496 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 CNTN2Q02246 1040 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 SLC18A2Q05940 514 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 FAAP100Q0VG06 881 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 NCAPG2Q86XI2 1143 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 RIOX2Q8IUF8 465 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 KCTD6Q8NC69 237 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 SLC44A1Q8WWI5 657 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 BRI3BPQ8WY22 251 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 NSL1Q96IY1 281 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 FAM111AQ96PZ2 611 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms