RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 BCCIPQ9P287 314 aaKnown RBP eCLIP8.55□□□□□ -1.04
CASP4-201ENST00000393150 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 VTI1BQ9UEU0 232 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 VAV3Q9UKW4 847 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 APOBEC2Q9Y235 224 aaKnown RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 YIPF1Q9Y548 306 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 ACACAQ13085 2346 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 ASXL3Q9C0F0 2248 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 SPEGQ15772 3267 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 PCNX2A6NKB5 2137 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 K7ERI5 159 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 CDX4O14627 284 aaPredicted RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 CAPN9O14815 690 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 MEFVO15553 781 aaPredicted RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 XPOTO43592 962 aaKnown RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 LYPLA2O95372 231 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 USP17L7P0C7H9 530 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 PSMA5P28066 241 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 HOXD12P35452 270 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 NAMPTP43490 491 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 DUSP4Q13115 394 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 SPDYCQ5MJ68 293 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 ATF7IP2Q5U623 682 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 BLOC1S2Q6QNY1 142 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 ERMNQ8TAM6 284 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 BRF1Q92994 677 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 TBC1D32Q96NH3 1257 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 KIF9Q9HAQ2 790 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 KCNMB3Q9NPA1 279 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 XPNPEP1Q9NQW7 623 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 FRRS1LQ9P0K9 344 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 NOTCH4Q99466 2003 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 ARHGEF35A5YM69 484 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 FAM221BA6H8Z2 402 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 OIP5O43482 229 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 SLC37A4O43826 429 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 MOSPD3O75425 235 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 CDKL5O76039 1030 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 EGFP01133 1207 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 GHRHP01286 108 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 ENGP17813 658 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 RARRES1P49788 294 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 GALK1P51570 392 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 NAB2Q15742 525 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 DUOXA1Q1HG43 343 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 CDCA2Q69YH5 1023 aaPredicted RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 ANO7Q6IWH7 933 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 FSTL4Q6MZW2 842 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 LYPD4Q6UWN0 246 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 DSTYKQ6XUX3 929 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 ZNF605Q86T29 641 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 DAGLBQ8NCG7 672 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 PIGOQ8TEQ8 1089 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 WHAMMQ8TF30 809 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 MRPS31Q92665 395 aaKnown RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 CD101Q93033 1021 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 ATP2A3Q93084 1043 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 PSMG2Q969U7 264 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 CRELD1Q96HD1 420 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 PGLYRP2Q96PD5 576 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 UBL7Q96S82 380 aaPredicted RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 SMG9Q9H0W8 520 aaKnown RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 EBF3Q9H4W6 596 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 WRAP73Q9P2S5 460 aaPredicted RBP8.54□□□□□ -1.04
CASP4-201ENST00000393150 KCNG1Q9UIX4 513 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 INVSQ9Y283 1065 aa8.54□□□□□ -1.04
CASP4-201ENST00000393150 HELZ2Q9BYK8 2649 aaKnown RBP8.53□□□□□ -1.04
CASP4-201ENST00000393150 SHISA8B8ZZ34 492 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 PDE2AO00408 941 aaPredicted RBP8.53□□□□□ -1.04
CASP4-201ENST00000393150 ADAMTS3O15072 1205 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 AP5Z1O43299 807 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 ITPKAP23677 461 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 PAX3P23760 479 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 HSPA4P34932 840 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 IFNAR2P48551 515 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 OSTNP61366 133 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 CCT2P78371 535 aaKnown RBP8.53□□□□□ -1.04
CASP4-201ENST00000393150 SEMA3BQ13214 749 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 GPR17Q13304 367 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 SLC14A1Q13336 389 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 MYBPC2Q14324 1141 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 TRIP6Q15654 476 aaKnown RBP8.53□□□□□ -1.04
CASP4-201ENST00000393150 CALCRLQ16602 461 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 ZNF568Q3ZCX4 644 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 MEI1Q5TIA1 1274 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 LYSMD4Q5XG99 296 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 SLC36A4Q6YBV0 504 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 CMTM8Q8IZV2 173 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 ENGASEQ8NFI3 743 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 TTC9Q92623 222 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 KIFAP3Q92845 792 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 CNOT6LQ96LI5 555 aaKnown RBP8.53□□□□□ -1.04
CASP4-201ENST00000393150 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 DUS2Q9NX74 493 aaKnown RBP8.53□□□□□ -1.04
CASP4-201ENST00000393150 HSFX1Q9UBD0 423 aa8.53□□□□□ -1.04
CASP4-201ENST00000393150 DMXL2Q8TDJ6 3036 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms