RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CEP135Q66GS9 1140 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 SPOPLQ6IQ16 392 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 PAQR9Q6ZVX9 377 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 CEP68Q76N32 757 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 WDR5BQ86VZ2 330 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 FAM160A2Q8N612 972 aaPredicted RBP17.64■□□□□ 0.41
PTPRK-208ENST00000392449 RPLP0P6Q8NHW5 317 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 GOLGA5Q8TBA6 731 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 MAPK8IP1Q9UQF2 711 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 CPQQ9Y646 472 aa17.64■□□□□ 0.41
PTPRK-208ENST00000392449 OAS1P00973 400 aaKnown RBP17.63■□□□□ 0.41
PTPRK-208ENST00000392449 RPN1P04843 607 aaKnown RBP17.63■□□□□ 0.41
PTPRK-208ENST00000392449 PSMD2Q13200 908 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 GAB4Q2WGN9 574 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 C1orf220Q5T0J3 134 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 FILIP1Q7Z7B0 1213 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 ACOT1Q86TX2 421 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 FAM35AQ86V20 835 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 SCAMP5Q8TAC9 235 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 CD101Q93033 1021 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 MED10Q9BTT4 135 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 GOLPH3LQ9H4A5 285 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 VRTNQ9H8Y1 702 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 SLC8A2Q9UPR5 921 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 MYOFQ9NZM1 2061 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 RETP07949 1114 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 CCDC130P13994 396 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 DRD1P21728 446 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 HOXA6P31267 233 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 SYKP43405 635 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 ATXN1P54253 815 aaKnown RBP17.63■□□□□ 0.41
PTPRK-208ENST00000392449 KRT85P78386 507 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 CCDC6Q16204 474 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 SLC9A9Q8IVB4 645 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 SFTPA1Q8IWL2 248 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 GPR161Q8N6U8 529 aaKnown RBP17.63■□□□□ 0.41
PTPRK-208ENST00000392449 CEP295NLQ96MC4 621 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 GDPD2Q9HCC8 539 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 NCOR2Q9Y618 2525 aa17.63■□□□□ 0.41
PTPRK-208ENST00000392449 SPTBN2O15020 2390 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 PDXKO00764 312 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 OLFM2O95897 454 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 FAM163BP0C2L3 166 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 TCF3P15923 654 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 CNR2P34972 360 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 OPRD1P41143 372 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 PGFP49763 221 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 SEC13P55735 322 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 SLC7A9P82251 487 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 AMPD2Q01433 879 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 LMNB2Q03252 620 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 MESP2Q0VG99 397 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 ZACNQ401N2 412 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 SV2AQ7L0J3 742 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 KBTBD6Q86V97 674 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 FUKQ8N0W3 1084 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 NUP93Q8N1F7 819 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 FBXO32Q969P5 355 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 SEMA4GQ9NTN9 838 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 CFAP97Q9P2B7 532 aa17.62■□□□□ 0.41
PTPRK-208ENST00000392449 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
PTPRK-208ENST00000392449 CDV3Q9UKY7 258 aaKnown RBP17.62■□□□□ 0.41
PTPRK-208ENST00000392449 SPAG17Q6Q759 2223 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 MYH10P35580 1976 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 DCDC2BA2VCK2 349 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 GDF9O60383 454 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 ATG13O75143 517 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 RPP40O75818 363 aaKnown RBP17.61■□□□□ 0.41
PTPRK-208ENST00000392449 BEST1O76090 585 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 CYP17A1P05093 508 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 TRIM49P0CI25 452 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 TRIM49CP0CI26 452 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 MBL2P11226 248 aaPredicted RBP17.61■□□□□ 0.41
PTPRK-208ENST00000392449 YWHAQP27348 245 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 NDST1P52848 882 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 SLC5A3P53794 718 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 SLITRK1Q96PX8 696 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 FAM49BQ9NUQ9 324 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 EHD2Q9NZN4 543 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 USP25Q9UHP3 1055 aa17.61■□□□□ 0.41
PTPRK-208ENST00000392449 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.6■□□□□ 0.41
PTPRK-208ENST00000392449 TNFRSF10BO14763 440 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 AXIN1O15169 862 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 COCHO43405 550 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 AP1G2O75843 785 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 NFATC1O95644 943 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 HLA-DRAP01903 254 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 PIK3CAP42336 1068 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 ASPAP45381 313 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 PDE6CP51160 858 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 AP3M2P53677 418 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 DPYDQ12882 1025 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 C12orf40Q86WS4 652 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 C12orf29Q8N999 325 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 ZMIZ2Q8NF64 920 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 SLC2A14Q8TDB8 520 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 GAB3Q8WWW8 586 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 SMOQ99835 787 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 CCSER2Q9H7U1 834 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms