RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 hCG_1984214I3L0E3 225 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ZNF185O15231 689 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 DNPH1O43598 174 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SRGAP2O75044 1071 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 USP1O94782 785 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TNFRSF6BO95407 300 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 LARGE1O95461 756 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 PRKCBP05771 671 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 MST1P26927 711 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 UQCRC1P31930 480 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 MAN1A1P33908 653 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ADD2P35612 726 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 CASP2P42575 452 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SCNN1GP51170 649 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 NXPH1P58417 271 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ACTR2P61160 394 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 CXADRP78310 365 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ADAM17P78536 824 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SCAPQ12770 1279 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 GPS1Q13098 491 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RRP1BQ14684 758 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 KCNAB1Q14722 419 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TAF5Q15542 800 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 CYP2A13Q16696 494 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TIGD6Q17RP2 521 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ZIK1Q3SY52 487 aaPredicted RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RABL3Q5HYI8 236 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RBM20Q5T481 1227 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ARHGAP40Q5TG30 622 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ERICH6BQ5W0A0 696 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RGS7BPQ6MZT1 257 aaPredicted RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RINT1Q6NUQ1 792 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 NFRKBQ6P4R8 1299 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TMED8Q6PL24 325 aaPredicted RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 LIMS2Q7Z4I7 341 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 IZUMO1Q8IYV9 350 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ABRAQ8N0Z2 381 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ZNF808Q8N4W9 903 aaPredicted RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 PPHLN1Q8NEY8 458 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SLC30A5Q8TAD4 765 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 FEZF2Q8TBJ5 459 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 DNAJB14Q8TBM8 379 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 CPT1CQ8TCG5 803 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ATRIPQ8WXE1 791 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 THAP4Q8WY91 577 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 OVCA2Q8WZ82 227 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 FUBP1Q96AE4 644 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SKA1Q96BD8 255 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 FAM136AQ96C01 138 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TRAPPC9Q96Q05 1148 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 NEU1Q99519 415 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SENP7Q9BQF6 1050 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SSBP3Q9BWW4 388 aaPredicted RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 XYLT2Q9H1B5 865 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 DEF6Q9H4E7 631 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 CXorf36Q9H7Y0 433 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 NOD2Q9HC29 1040 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RIC8AQ9NPQ8 531 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TMLHEQ9NVH6 421 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SAGE1Q9NXZ1 904 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 VSX1Q9NZR4 365 aaPredicted RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 STEAP1Q9UHE8 339 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 CNOT11Q9UKZ1 510 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SCAF8Q9UPN6 1271 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 SORCS3Q9UPU3 1222 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TBC1D30Q9Y2I9 924 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 MRPS17Q9Y2R5 130 aaKnown RBP3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 TCAF1Q9Y4C2 921 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 ITIH6Q6UXX5 1313 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 COL15A1P39059 1388 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 AATKQ6ZMQ8 1374 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 TRGV11A0A075B6L2 103 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 OTOL1A6NHN0 477 aaPredicted RBP3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 AHRRA9YTQ3 701 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 PSMD9O00233 223 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 EIF5BO60841 1220 aaKnown RBP3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ONECUT2O95948 504 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ITGB3P05106 788 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ELANEP08246 267 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ARP10275 920 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 CHRM3P20309 590 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 MTHFSP49914 203 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 VAV2P52735 878 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 DGKQP52824 942 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 TIRAPP58753 221 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 VAMP2P63027 116 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 TIAL1Q01085 375 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ITIH3Q06033 890 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 PRKD1Q15139 912 aaPredicted RBP3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 FAM110CQ1W6H9 321 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 SLC4A8Q2Y0W8 1093 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 PTCHD3Q3KNS1 767 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 TBRG1Q3YBR2 411 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 CD300EQ496F6 205 aaPredicted RBP3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ZNF569Q5MCW4 686 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 TMEM63BQ5T3F8 832 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 TEDDM1Q5T9Z0 273 aa3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 B3GNTL1Q67FW5 361 aaPredicted RBP3.38□□□□□ -1.87
TRAJ40-201ENST00000390497 ABLIM2Q6H8Q1 611 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms