RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZMYND8Q9ULU4 1186 aaPredicted RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 SNX13Q9Y5W8 968 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 C2CD2LO14523 706 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 SPAG6O75602 509 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 NPTXRO95502 500 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 PMLP29590 882 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ACTR2P61160 394 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 TEDDM1Q5T9Z0 273 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 ABRAQ8N0Z2 381 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 HSD17B14Q9BPX1 270 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 FHDC1Q9C0D6 1143 aaPredicted RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 SCAF8Q9UPN6 1271 aaKnown RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 COMMD3-BMI1R4GMX3 469 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 SETD1AO15047 1707 aaKnown RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 TTC33Q6PID6 262 aaPredicted RBP14.81□□□□□ -0.04
RTF1-201ENST00000389629 OR6Y1Q8NGX8 325 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 PGBD4Q96DM1 585 aa14.81□□□□□ -0.04
RTF1-201ENST00000389629 RGS7P49802 495 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 ORC1Q13415 861 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 CYP4X1Q8N118 509 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 EMC1Q8N766 993 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 TMEM109Q9BVC6 243 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 MRPL4Q9BYD3 311 aaKnown RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 MTFR1LQ9H019 292 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 PAIP1Q9H074 479 aaKnown RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 ARHGEF37A1IGU5 675 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 ABLIM1O14639 778 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 LYNP07948 512 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 FAM58BPP0C7Q3 252 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 KCNA4P22459 653 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 FOXN2P32314 431 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 ATP1A4Q13733 1029 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 EMC2Q15006 297 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 RBM44Q6ZP01 1051 aaKnown RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 FAM228AQ86W67 206 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 CDKL3Q8IVW4 592 aaPredicted RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 SHC3Q92529 594 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 AVENQ9NQS1 362 aaPredicted RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 PAK5Q9P286 719 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 WASF2Q9Y6W5 498 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 PSMD10O75832 226 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 ZMPSTE24O75844 475 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 RGS2P41220 211 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 SPP2Q13103 211 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 LBRQ14739 615 aaKnown RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 PDK3Q15120 406 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 B3GNT6Q6ZMB0 384 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 KIAA2013Q8IYS2 634 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.8□□□□□ -0.04
RTF1-201ENST00000389629 MROH7Q68CQ1 1323 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 KBTBD13C9JR72 458 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 ZNF189O75820 626 aaPredicted RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 NR3C2P08235 984 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 SERPINB9P50453 376 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 DCTN2Q13561 401 aaKnown RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 MYLK4Q86YV6 388 aaPredicted RBP14.8□□□□□ -0.04
RTF1-201ENST00000389629 SNX25Q9H3E2 840 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 RSAD1Q9HA92 442 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 IL1RL2Q9HB29 575 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 SLC17A7Q9P2U7 560 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 ATXN10Q9UBB4 475 aa14.8□□□□□ -0.04
RTF1-201ENST00000389629 SYCE1LA8MT33 242 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 ENTPD3O75355 529 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 SHROOM1Q2M3G4 852 aaPredicted RBP14.79□□□□□ -0.04
RTF1-201ENST00000389629 SLC5A9Q2M3M2 681 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 GPR141Q7Z602 305 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 GMCL1P1Q8NEA9 526 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 APOPT1Q96IL0 206 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 BFARQ9NZS9 450 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 PCDHA2Q9Y5H9 948 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 F8VP50 259 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 NFIBO00712 420 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 ZC3H11AO75152 810 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTF1-201ENST00000389629 VAV1P15498 845 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 LPCAT4Q643R3 524 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 PDPK2PQ6A1A2 396 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 PID1Q7Z2X4 250 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 GSTCDQ8NEC7 633 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 OR6B3Q8NGW1 331 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 PBXIP1Q96AQ6 731 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 TRIM15Q9C019 465 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 MRPL40Q9NQ50 206 aaKnown RBP14.79□□□□□ -0.04
RTF1-201ENST00000389629 DUOX1Q9NRD9 1551 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 SGSM1Q2NKQ1 1148 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 DCAF15Q66K64 600 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 VSTM1Q6UX27 236 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 SULF1Q8IWU6 871 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 KREMEN1Q96MU8 473 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 BAG5Q9UL15 447 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 SNX5Q9Y5X3 404 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 CDY2AQ9Y6F7 541 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 CDY1Q9Y6F8 540 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 DCCP43146 1447 aa14.79□□□□□ -0.04
RTF1-201ENST00000389629 DCXO43602 365 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 PEX11AO75192 247 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 GSTA3Q16772 222 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms