RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 APPL1Q9UKG1 709 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 PKP3Q9Y446 797 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 TNS2Q63HR2 1409 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 O00370 1275 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 KLRC4O43908 158 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 PAX7P23759 505 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 ADRA1DP25100 572 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 RPA3P35244 121 aaPredicted RBP5.18□□□□□ -1.58
LTN1-202ENST00000389194 CHKAP35790 457 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 THPOP40225 353 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 ATN1P54259 1190 aaPredicted RBP5.18□□□□□ -1.58
LTN1-202ENST00000389194 ITGA9Q13797 1035 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 FLOT2Q14254 428 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 RASA2Q15283 850 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 VPS72Q15906 364 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 PRAMEF19Q5SWL8 479 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 NAIF1Q69YI7 327 aaPredicted RBP5.18□□□□□ -1.58
LTN1-202ENST00000389194 STRA8Q7Z7C7 330 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 DDX53Q86TM3 631 aaKnown RBP5.18□□□□□ -1.58
LTN1-202ENST00000389194 MRPL1Q9BYD6 325 aaKnown RBP5.18□□□□□ -1.58
LTN1-202ENST00000389194 RSAD1Q9HA92 442 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 ERAP1Q9NZ08 941 aa5.18□□□□□ -1.58
LTN1-202ENST00000389194 WDR27A2RRH5 827 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 FKBP9O95302 570 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 GNAT1P11488 350 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 TNFSF9P41273 254 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CSHL1Q14406 222 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 DMC1Q14565 340 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 FKBP9P1Q75LS8 142 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.17□□□□□ -1.58
LTN1-202ENST00000389194 GIPC2Q8TF65 315 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 GRAMD1AQ96CP6 724 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CALR3Q96L12 384 aaKnown RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 FAM129AQ9BZQ8 928 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PAK5Q9P286 719 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SIK3Q9Y2K2 1263 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 KNL1Q8NG31 2342 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 KBTBD13C9JR72 458 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ATP9AO75110 1047 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ADRB2P07550 413 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 RARGP13631 454 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ABCD1P33897 745 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 NDST1P52848 882 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 RPL7AP62424 266 aaKnown RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 KCNJ2P63252 427 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 LAMTOR4Q0VGL1 99 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PGM5Q15124 567 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CYP2R1Q6VVX0 501 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 DNAJC14Q6Y2X3 702 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 CHSY1Q86X52 802 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ZDHHC15Q96MV8 337 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PDCD2LQ9BRP1 358 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 HAUS8Q9BT25 410 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 MAN1C1Q9NR34 630 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 LRRC4BQ9NT99 713 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SALL4Q9UJQ4 1053 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ZNF229Q9UJW7 825 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SLC13A4Q9UKG4 626 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SNX13Q9Y5W8 968 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 RGL2O15211 777 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 DLK2Q6UY11 383 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 MCOLN2Q8IZK6 566 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ACTRT1Q8TDG2 376 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 THAP11Q96EK4 314 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 NRBF2Q96F24 287 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CNDP1Q96KN2 507 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 WDR18Q9BV38 432 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PSD3Q9NYI0 1048 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SNX5Q9Y5X3 404 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PLEKHG2Q9H7P9 1386 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 TCRBV7S2A1N4TA0A589 114 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ADM5C9JUS6 153 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 DDR1Q08345 913 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 FAAP100Q0VG06 881 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 NT5DC1Q5TFE4 455 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ZNF786Q8N393 782 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 C12orf29Q8N999 325 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 LNX1Q8TBB1 728 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 SYN2Q92777 582 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 ZNF560Q96MR9 790 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 NR1H4Q96RI1 486 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 DDX50Q9BQ39 737 aaKnown RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 SEMA6AQ9H2E6 1030 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 TSPAN16Q9UKR8 245 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 OGTO15294 1046 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ZBTB24O43167 697 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 KATNA1O75449 491 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 GUCA1CO95843 209 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 GH1P01241 217 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 FAM200BP0CF97 657 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 MGAT1P26572 445 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 RFX3P48380 749 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 BLVRAP53004 296 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PKNOX1P55347 436 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 BACE1P56817 501 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PTENP60484 403 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 TAP1Q03518 808 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 QPCTQ16769 361 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CLEC16AQ2KHT3 1053 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CPNE8Q86YQ8 564 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms