RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 MMP3P08254 477 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CETN2P41208 172 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 IRF5Q13568 498 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 KPNB1Q14974 876 aaKnown RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 SNX30Q5VWJ9 437 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 OR52E8Q6IFG1 317 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 DRICH1Q6PGQ1 229 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 OTOAQ7RTW8 1153 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF677Q86XU0 584 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CPNE8Q86YQ8 564 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 RASAL3Q86YV0 1011 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 KATNAL2Q8IYT4 538 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 OR6J1Q8NGC5 347 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 RNF217Q8TC41 542 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF668Q96K58 619 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 IMPG2Q9BZV3 1241 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 PHACTR1Q9C0D0 580 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 MINDY3Q9H8M7 445 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 DLGAP2Q9P1A6 1054 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 PSMC3IPQ9P2W1 217 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 C2CD2Q9Y426 696 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 KAT6AQ92794 2004 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 FAM170AA1A519 330 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MAGEA13PA6NCF6 341 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 A8MXQ7 604 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 H0Y3Z8 333 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TM9SF1O15321 606 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 B4GALT5O43286 388 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 DNAJC6O75061 913 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SPAG7O75391 227 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 RPA3P35244 121 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 NOP14P78316 857 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SLC34A1Q06495 639 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MAP2K5Q13163 448 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MORF4L2Q15014 288 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 DGKDQ16760 1214 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MORN1Q5T089 497 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 EEF1DP3Q658K8 133 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SPOPLQ6IQ16 392 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 CYP4F22Q6NT55 531 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ARHGAP24Q8N264 748 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TTC8Q8TAM2 541 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SPOCK2Q92563 424 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF75CPQ92670 426 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SYNCQ9H7C4 482 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 APOBEC3GQ9HC16 384 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 PDP2Q9P2J9 529 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 STX18Q9P2W9 335 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF212Q9UDV6 495 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 DOCK3Q8IZD9 2030 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 DNALI1O14645 258 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ASS1P00966 412 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 RALAP11233 206 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 UNGP13051 313 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ACO1P21399 889 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 VPS41P49754 854 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 RPS6KA3P51812 740 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 DYNC1I2Q13409 638 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 CCDC142Q17RM4 750 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 P3H1Q32P28 736 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 KHDC1Q4VXA5 237 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 GSTA5Q7RTV2 222 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MTDHQ86UE4 582 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MCOLN2Q8IZK6 566 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 EXD1Q8NHP7 514 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 OSBPL8Q9BZF1 889 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 CDT1Q9H211 546 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 VPS11Q9H270 941 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SAYSD1Q9NPB0 183 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 GRID1Q9ULK0 1009 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 AKT3Q9Y243 479 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 R3HDM2Q9Y2K5 976 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 NUB1Q9Y5A7 615 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 A0A087WZ62 844 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 B4GALT4O60513 344 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 PROSCO94903 275 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 HOXC6P09630 235 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 IQCF3P0C7M6 154 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TUBP50607 506 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TNFAIP2Q03169 654 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 AP1B1Q10567 949 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 KRT72Q14CN4 511 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 RCN1Q15293 331 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TAF1CQ15572 869 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 GRIK4Q16099 956 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SLC5A9Q2M3M2 681 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 PPP1R2P3Q6NXS1 205 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 LRRC74BQ6ZQY2 392 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms