RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 ADRB2P07550 413 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 SNRPAP09012 282 aaKnown RBP12.66□□□□□ -0.38
SHOX-203ENST00000381578 SPATA31D3P0C874 917 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 PSMC1P62191 440 aaKnown RBP12.66□□□□□ -0.38
SHOX-203ENST00000381578 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
SHOX-203ENST00000381578 MYBPC3Q14896 1274 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 CEP55Q53EZ4 464 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 SFT2D3Q587I9 215 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 SPATA31D4Q6ZUB0 917 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 UTS2BQ765I0 119 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 ZBTB33Q86T24 672 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 EMC1Q8N766 993 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 CXorf38Q8TB03 319 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 EBF4Q9BQW3 602 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 UNC45AQ9H3U1 944 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 PARVAQ9NVD7 372 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 TSC22D4Q9Y3Q8 395 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
SHOX-203ENST00000381578 KAT6AQ92794 2004 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 TM9SF1O15321 606 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.38
SHOX-203ENST00000381578 ZBED1O96006 694 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 EEF1B2P24534 225 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 ORC1Q13415 861 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 FLOT2Q14254 428 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 CYP1B1Q16678 543 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 TREML1Q86YW5 311 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 FEZF2Q8TBJ5 459 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 SCYL1Q96KG9 808 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 SEMA6AQ9H2E6 1030 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 BAZ2AQ9UIF9 1905 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 LIASO43766 372 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 NDUFB10O96000 172 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 RARBP10826 455 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 UQCRBP14927 111 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 TCF4P15884 667 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 CBX3Q13185 183 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 C15orf52Q6ZUT6 534 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 FAM71AQ8IYT1 594 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 DGCR14Q96DF8 476 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 PAIP1Q9H074 479 aaKnown RBP12.65□□□□□ -0.38
SHOX-203ENST00000381578 PLA2G4CQ9UP65 541 aa12.65□□□□□ -0.38
SHOX-203ENST00000381578 MROH7Q68CQ1 1323 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 MEIS2O14770 477 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 KCNN4O15554 427 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 TPST1O60507 370 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 GRAP2O75791 330 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 TMED10P49755 219 aaKnown RBP12.65□□□□□ -0.39
SHOX-203ENST00000381578 RPS6P62753 249 aaKnown RBP12.65□□□□□ -0.39
SHOX-203ENST00000381578 FNBP1LQ5T0N5 605 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 SPOCD1Q6ZMY3 1216 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 LPCAT2Q7L5N7 544 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 PODNQ7Z5L7 613 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 SESTD1Q86VW0 696 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 CSRNP1Q96S65 589 aa12.65□□□□□ -0.39
SHOX-203ENST00000381578 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.39
SHOX-203ENST00000381578 SYNJ2BP-COX16A0A087WUM0 186 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 TM7SF2O76062 418 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 FGFR1P11362 822 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 SMARCA1P28370 1054 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 VCPP55072 806 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 HDAC4P56524 1084 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 TFAMQ00059 246 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 PDK1Q15118 436 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 APOPT1Q96IL0 206 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 POLR3CQ9BUI4 534 aaPredicted RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 COX16Q9P0S2 106 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 LRP5O75197 1615 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 SORBS2O94875 1100 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 HLA-DRAP01903 254 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 PSMD7P51665 324 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 VWA5B1Q5TIE3 1220 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 LAYNQ6UX15 382 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 SERAC1Q96JX3 654 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 GPR88Q9GZN0 384 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 TTLL3Q9Y4R7 772 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 CSPG5O95196 566 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 FDX1P10109 184 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 RPL5P46777 297 aaKnown RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 CDH6P55285 790 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 TPD52P55327 224 aaPredicted RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 SIX1Q15475 284 aaPredicted RBP12.64□□□□□ -0.39
SHOX-203ENST00000381578 TMEM63BQ5T3F8 832 aa12.64□□□□□ -0.39
SHOX-203ENST00000381578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.64□□□□□ -0.39
SHOX-203ENST00000381578 AMIGO2Q86SJ2 522 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms