RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 E5RJQ4 531 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 DNALI1O14645 258 aaPredicted RBP14.46□□□□□ -0.1
SDC1-202ENST00000381150 TOM1L1O75674 476 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 TNNI1P19237 187 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 CDK7P50613 346 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 PTK7Q13308 1070 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 NCOA4Q13772 614 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 ZNF568Q3ZCX4 644 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 ZNF280CQ8ND82 737 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 FAM210AQ96ND0 272 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 APOL6Q9BWW8 343 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 SLC7A8Q9UHI5 535 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 COQ4Q9Y3A0 265 aa14.46□□□□□ -0.1
SDC1-202ENST00000381150 UMODL1Q5DID0 1318 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 ZNFX1Q9P2E3 1918 aaKnown RBP14.45□□□□□ -0.1
SDC1-202ENST00000381150 PRR5-ARHGAP8B1AHC4 643 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 CYB561D2O14569 222 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 MAGEB2O15479 319 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 MAFGO15525 162 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 TYROBPO43914 113 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 ZMPSTE24O75844 475 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 GLRA2P23416 452 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 DSG3P32926 999 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 SOX10P56693 466 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 ARHGAP8P85298 464 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 ANKRD22Q5VYY1 191 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 RSPH3Q86UC2 560 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 RSAD2Q8WXG1 361 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 PTCD3Q96EY7 689 aaKnown RBP14.45□□□□□ -0.1
SDC1-202ENST00000381150 IWS1Q96ST2 819 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 TUBB6Q9BUF5 446 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 COPEO14579 308 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 MAP3K6O95382 1288 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 GALK1P51570 392 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 AQP4P55087 323 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 DLG1Q12959 904 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 BMPR2Q13873 1038 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 MYBPC3Q14896 1274 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 TMEM132BQ14DG7 1078 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 SNRNP35Q16560 246 aaKnown RBP14.45□□□□□ -0.1
SDC1-202ENST00000381150 LIN9Q5TKA1 542 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 VTI1AQ96AJ9 217 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 IFT43Q96FT9 208 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 AK5Q9Y6K8 562 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 MROH7Q68CQ1 1323 aa14.45□□□□□ -0.1
SDC1-202ENST00000381150 ZBTB7AO95365 584 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 PEX2P28328 305 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 OAZ1P54368 228 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 FAAP100Q0VG06 881 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 CHI3L2Q15782 390 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 PRAMEF18Q5VWM3 479 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 TMEM270Q6UE05 265 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 NLRX1Q86UT6 975 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 MAP7D3Q8IWC1 876 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 MCOLN2Q8IZK6 566 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 AGR3Q8TD06 166 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 NAT14Q8WUY8 206 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 DTNBP1Q96EV8 351 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 OLFM3Q96PB7 478 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 GRIP2Q9C0E4 1043 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 TRAFD1O14545 582 aaPredicted RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 HNRNPCL1O60812 293 aaKnown RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 TCEA3O75764 348 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 DESP17661 470 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 CCND2P30279 289 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 RPL7AP62424 266 aaKnown RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 MSS51Q4VC12 460 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 KRT39Q6A163 491 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 SNRNP48Q6IEG0 339 aaKnown RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 RBM44Q6ZP01 1051 aaKnown RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 MYLK4Q86YV6 388 aaPredicted RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 OR6Y1Q8NGX8 325 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 MIPOL1Q8TD10 442 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 MFSD14AQ96MC6 490 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 XPNPEP1Q9NQW7 623 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 MAGEB3O15480 346 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 RARBP10826 455 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 MSX2P35548 267 aaPredicted RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 BPIFB4P59827 614 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 ZNF200P98182 395 aaPredicted RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 CENPCQ03188 943 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 HIC1Q14526 733 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 R3HDM1Q15032 1099 aaKnown RBP14.44□□□□□ -0.1
SDC1-202ENST00000381150 SFT2D3Q587I9 215 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 RALGPS1Q5JS13 557 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 FNBP1LQ5T0N5 605 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 TMPRSS6Q8IU80 811 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 HELQQ8TDG4 1101 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 LRRN4Q8WUT4 740 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 PPP2R3CQ969Q6 453 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 C1orf112Q9NSG2 853 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 GABBR1Q9UBS5 961 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 RPS6KL1Q9Y6S9 549 aa14.44□□□□□ -0.1
SDC1-202ENST00000381150 SPDYE16A6NNV3 312 aaPredicted RBP14.43□□□□□ -0.1
SDC1-202ENST00000381150 SUPT3HO75486 399 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
SDC1-202ENST00000381150 NCF2P19878 526 aaPredicted RBP14.43□□□□□ -0.1
SDC1-202ENST00000381150 SLC1A1P43005 524 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms