RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MREGQ8N565 214 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
CDX2-201ENST00000381020 VPS11Q9H270 941 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 HMGCRP04035 888 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 KRT4P19013 534 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 PLEKHA7Q6IQ23 1121 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 SERPINB12Q96P63 405 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 STRA6Q9BX79 667 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 ELOVL4Q9GZR5 314 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 COL2A1P02458 1487 aaPredicted RBP13.05□□□□□ -0.32
CDX2-201ENST00000381020 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
CDX2-201ENST00000381020 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 KDELR1P24390 212 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 BCAT1P54687 386 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 EDEM1Q92611 657 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 EIF2AQ9BY44 585 aaKnown RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 G3BP2Q9UN86 482 aaKnown RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 DFFAO00273 331 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 TREHO43280 583 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 KRT38O76015 456 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 C22orf31O95567 290 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 EFHC1Q5JVL4 640 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 FAM183BPQ6ZVS7 135 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 MRPL45Q9BRJ2 306 aaKnown RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 PAK5Q9P286 719 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 PSMC3IPQ9P2W1 217 aaPredicted RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 PRDM4Q9UKN5 801 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 DNALI1O14645 258 aaPredicted RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 THP07101 528 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 HOXC6P09630 235 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
CDX2-201ENST00000381020 NR1H3Q13133 447 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 SHCBP1Q8NEM2 672 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDX2-201ENST00000381020 LPPQ93052 612 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 MAML3Q96JK9 1138 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 LAMB1P07942 1786 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 NRCAMQ92823 1304 aa13.04□□□□□ -0.32
CDX2-201ENST00000381020 ERBB2P04626 1255 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 MMP3P08254 477 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDX2-201ENST00000381020 PNPLA4P41247 253 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 ARHGAP1Q07960 439 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 TXNRD3NBQ6F5E7 133 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 FZD8Q9H461 694 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 DDX43Q9NXZ2 648 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 UBR3Q6ZT12 1888 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 EEF2KO00418 725 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 CYP1A1P04798 512 aaPredicted RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 AMPD1P23109 780 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 EPHB2P29323 1055 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 OR1G1P47890 313 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 PTK7Q13308 1070 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 PTK6Q13882 451 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 TAF5Q15542 800 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 PPP4R1Q8TF05 950 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 PLEKHA5Q9HAU0 1116 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 LIASO43766 372 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 HMBSP08397 361 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 RAD23BP54727 409 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 COPS2P61201 443 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 WSCD1Q658N2 575 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 MSL3Q8N5Y2 521 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 TWNKQ96RR1 684 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 CD48P09326 243 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 ACADSBP45954 432 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 TKTL1P51854 596 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 DRG2P55039 364 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 SESN3P58005 492 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 BST2Q10589 180 aaKnown RBP13.03□□□□□ -0.32
CDX2-201ENST00000381020 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 LVRNQ6Q4G3 990 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 DENND5BQ6ZUT9 1274 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 SPATA21Q7Z572 469 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 APOL2Q9BQE5 337 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 PCDH9Q9HC56 1237 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 SLC38A7Q9NVC3 462 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 BFARQ9NZS9 450 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms