RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 USP13Q92995 863 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 L2HGDHQ9H9P8 463 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 KLHL3Q9UH77 587 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 NEDD4P46934 1319 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 C5orf58C9J3I9 102 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 PPP6R2O75170 966 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 JAK3P52333 1124 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 GSCP56915 257 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 SURF1Q15526 300 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ARSHQ5FYA8 562 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 C1orf54Q8WWF1 131 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 SPACA7Q96KW9 195 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ROPN1BQ9BZX4 212 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ROPN1Q9HAT0 212 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 RBAKQ9NYW8 714 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 LSM7Q9UK45 103 aaKnown RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 PRAG1Q86YV5 1406 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 H7C0S8 307 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 ATF6P18850 670 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 SKIV2L2P42285 1042 aaKnown RBP11.15□□□□□ -0.63
CLCN4-202ENST00000380833 SCARF1Q14162 830 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.63
CLCN4-202ENST00000380833 LXNQ9BS40 222 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 THAP9Q9H5L6 903 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 RNPEPL1Q9HAU8 725 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 FBXL21Q9UKT6 434 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 COQ6Q9Y2Z9 468 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 PKP3Q9Y446 797 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.63
CLCN4-202ENST00000380833 LRG1P02750 347 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ETS2P15036 469 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ITGALP20701 1170 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 PGDP52209 483 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SLC5A9Q2M3M2 681 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 IFNEQ86WN2 208 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 LRRC6Q86X45 466 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ADGRF4Q8IZF3 695 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 EMILIN2Q9BXX0 1053 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 TRIM54Q9BYV2 358 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 NUP50Q9UKX7 468 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 EDARQ9UNE0 448 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 KRT87PA6NCN2 255 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 TPI1P60174 286 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 BTN3A2P78410 334 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 AASDHQ4L235 1098 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ANKRD49Q8WVL7 239 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ELMO2Q96JJ3 720 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 AGAP1Q9UPQ3 857 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 NPC1L1Q9UHC9 1359 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ARHGEF33A8MVX0 844 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ALDH5A1P51649 535 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 CDH6P55285 790 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 BCAR1P56945 870 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 QPRTQ15274 297 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 GLRA4Q5JXX5 417 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 NECAB2Q7Z6G3 386 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SLC30A5Q8TAD4 765 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 DHTKD1Q96HY7 919 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 PLEKHA8Q96JA3 519 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 KIAA1586Q9HCI6 787 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ZSWIM6Q9HCJ5 1215 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SCUBE2Q9NQ36 999 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 MAD2L2Q9UI95 211 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SRRM3A6NNA2 597 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 FOXP2O15409 715 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 IL6P05231 212 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 HOXB7P09629 217 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 TCF3P15923 654 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 QARSP47897 775 aaKnown RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 STARP49675 285 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ALDH6A1Q02252 535 aaKnown RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 EFHC1Q5JVL4 640 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 TMEM53Q6P2H8 277 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 MTHFD1LQ6UB35 978 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 KAT2BQ92831 832 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 POLR1BQ9H9Y6 1135 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 PIK3R1P27986 724 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 MCAMP43121 646 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 ERAP2Q6P179 960 aa11.14□□□□□ -0.63
CLCN4-202ENST00000380833 CYP4V2Q6ZWL3 525 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-202ENST00000380833 MRPL4Q9BYD3 311 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms