RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 RAD51Q06609 339 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TBC1D19Q8N5T2 526 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 TRPC4APQ8TEL6 797 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 NT5C1AQ9BXI3 368 aa17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL4A3BP-203ENST00000380494 POU4F1Q01851 419 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 TWF2Q6IBS0 349 aaKnown RBP17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 SPOCD1Q6ZMY3 1216 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 C16orf86Q6ZW13 317 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 OR8H2Q8N162 312 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 OLFM1Q99784 485 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 GORASP1Q9BQQ3 440 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 KCNK4Q9NYG8 393 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 KLHL3Q9UH77 587 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 PNMA3Q9UL41 463 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 BCS1LQ9Y276 419 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 PROSCO94903 275 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 SLC1A6P48664 564 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 SNX17Q15036 470 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 NRDE2Q9H7Z3 1164 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 COMMD8Q9NX08 183 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 TMEM191CA6NGB0 347 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 CYP27B1O15528 508 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 UNC5CO95185 931 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 APBA3O96018 575 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 MAPK1P28482 360 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 MEA1Q16626 185 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ARHGAP17Q68EM7 881 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 MAGEC3Q8TD91 643 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 KCTD14Q9BQ13 255 aaPredicted RBP17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 THUMPD3Q9BV44 507 aaKnown RBP17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 DCLK3Q9C098 648 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 LRRC40Q9H9A6 602 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ACTL7BQ9Y614 415 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 EIF2S1P05198 315 aaKnown RBP17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ARMC4Q5T2S8 1044 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ERO1BQ86YB8 467 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 SEPT1Q8WYJ6 367 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 SH3KBP1Q96B97 665 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 IL12RB1P42701 662 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 RGS7P49802 495 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 DMPKQ09013 629 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 COG2Q14746 738 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF398Q8TD17 642 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 BDH2Q9BUT1 245 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 C9orf16Q9BUW7 83 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 RNPEPQ9H4A4 650 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 ANKEF1Q9NU02 776 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 TJP2Q9UDY2 1190 aa17.67■□□□□ 0.42
COL4A3BP-203ENST00000380494 COL15A1P39059 1388 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 FOXN3O00409 490 aaPredicted RBP17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 FUT11Q495W5 492 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 CCDC80Q76M96 950 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 NYAP2Q9P242 653 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 TSR3Q9UJK0 312 aaKnown RBP17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF862O60290 1169 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 CYP11B1P15538 503 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 IREB2P48200 963 aaKnown RBP17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 GEMP55040 296 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 TRIM71Q2Q1W2 868 aaKnown RBP17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 Q4G0T1 1027 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 TTC27Q6P3X3 843 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 MOXD1Q6UVY6 613 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 SNX31Q8N9S9 440 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 RNF149Q8NC42 400 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 URGCPQ8TCY9 931 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 APOL4Q9BPW4 351 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 TRIM8Q9BZR9 551 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 TCF7L2Q9NQB0 619 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 RBP1P09455 135 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 ATP6V1C1P21283 382 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 HEATR4Q86WZ0 1026 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 SLC22A9Q8IVM8 553 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 CKAP2Q8WWK9 683 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF75CPQ92670 426 aaPredicted RBP17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 SENP2Q9HC62 589 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 TAF6LQ9Y6J9 622 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 E9PBE3 544 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 PDE9AO76083 593 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 EMC2Q15006 297 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 MARK2Q7KZI7 788 aaKnown RBP17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 PLGRKTQ9HBL7 147 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 NINJ2Q9NZG7 142 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
COL4A3BP-203ENST00000380494 VWA5AO00534 786 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RPL21P46778 160 aaKnown RBP17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 NAB1Q13506 487 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZNF662Q6ZS27 426 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 DHFR2Q86XF0 187 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 FBXL16Q8N461 479 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 SETD9Q8NE22 299 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RDM1Q8NG50 284 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 FOPNLQ96NB1 174 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms