RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ABHD16BQ9H3Z7 469 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 WDR35Q9P2L0 1181 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 SLC45A1Q9Y2W3 748 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 SNX9Q9Y5X1 595 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 PDCD11Q14690 1871 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 DYNC1LI2O43237 492 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GALR2O43603 387 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TCEA3O75764 348 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GABBR2O75899 941 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 P4HA1P13674 534 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CDR1P51861 262 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 SATB1Q01826 763 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GOLGA7BQ2TAP0 167 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 RNF187Q5TA31 235 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 OR6B2Q6IFH4 312 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 PMF1Q6P1K2 205 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 LCLAT1Q6UWP7 414 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 NPNTQ6UXI9 565 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 BBS12Q6ZW61 710 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TAOK1Q7L7X3 1001 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TTC30AQ86WT1 665 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CMASQ8NFW8 434 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 RXFP2Q8WXD0 754 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CFAP57Q96MR6 1250 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 NT5C1AQ9BXI3 368 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 STMN4Q9H169 189 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 FAM49BQ9NUQ9 324 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 EURLQ9NYK6 297 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TCRBV7S3A2A0A539 114 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 C2CD4BA6NLJ0 364 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 AKAP5P24588 427 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 MSS51Q4VC12 460 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CATSPER4Q7RTX7 472 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PLEKHH3Q7Z736 793 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PNMA8AQ86V59 439 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF410Q86VK4 478 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ANKRD42Q8N9B4 389 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM40Q8WWA1 233 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PRCCQ92733 491 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 KAT2BQ92831 832 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CABS1Q96KC9 395 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 APOL6Q9BWW8 343 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 B3GNT5Q9BYG0 378 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ADAM33Q9BZ11 813 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 NXF3Q9H4D5 531 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PCDH9Q9HC56 1237 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 KCNK9Q9NPC2 374 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 FLRT1Q9NZU1 646 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 IQCA1LA6NCM1 817 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PIAS1O75925 651 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 RNF8O76064 485 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 KIAA0754O94854 1291 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 SMIM10L2AP0DMW4 78 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 SMIM10L2BP0DMW5 78 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 PDGFRAP16234 1089 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CTCFP49711 727 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF143P52747 638 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF200P98182 395 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ATP11AP98196 1134 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 MORF4L2Q15014 288 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ZBTB6Q15916 424 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 KYAT1Q16773 422 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 FNBP1LQ5T0N5 605 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 GKAP1Q5VSY0 366 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 YTHDF3Q7Z739 585 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 SPATS2Q86XZ4 545 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 RFX6Q8HWS3 928 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ANKMY2Q8IV38 441 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 SCUBE3Q8IX30 993 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 SRRM1Q8IYB3 904 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CCDC13Q8IYE1 715 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 ZBED8Q8IZ13 594 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CACNA2D3Q8IZS8 1091 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CCHCR1Q8TD31 782 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CPT1BQ92523 772 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■■■□□ 15.9
PDLIM5-204ENST00000380176 DPEP3Q9H4B8 488 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 GBA2Q9HCG7 927 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 LGALS13Q9UHV8 139 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 CPA4Q9UI42 421 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
PDLIM5-204ENST00000380176 STAU1O95793 577 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 BRAFP15056 766 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 TFE3P19532 575 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GPD1P21695 349 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 PDIA2Q13087 525 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC14Q49A88 953 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 PKDCCQ504Y2 493 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 IQSEC1Q6DN90 963 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC27A1Q6PCB7 646 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 MICALCLQ6ZW33 695 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM71DQ8N9W8 422 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GDAP1Q8TB36 358 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 DNAJB3Q8WWF6 145 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms