RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GTF3C4Q9UKN8 822 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 UBQLN1Q9UMX0 589 aaKnown RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 CNTN6Q9UQ52 1028 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 CEP350Q5VT06 3117 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 GOLGA8IPA6NC78 632 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 GOLGA8JA6NMD2 632 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 RECQL4O94761 1208 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 CCDC172P0C7W6 258 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 CXCL8P10145 99 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 GCLMP48507 274 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 GCNT1Q02742 428 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 PTP4A2Q12974 167 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 GRIK3Q13003 919 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 PPIGQ13427 754 aaKnown RBP eCLIP8.15□□□□□ -1.11
CDKL5-202ENST00000379996 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 ANKRD20A8PQ5CZ79 823 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 FBXW10Q5XX13 1052 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 TWF2Q6IBS0 349 aaKnown RBP8.15□□□□□ -1.11
CDKL5-202ENST00000379996 AGMOQ6ZNB7 445 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 SV2AQ7L0J3 742 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 RELL1Q8IUW5 271 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 TMEM192Q8IY95 271 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 FBXL13Q8NEE6 735 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 ANKRD36BP1Q96IX9 119 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF668Q96K58 619 aaPredicted RBP8.15□□□□□ -1.11
CDKL5-202ENST00000379996 FNBP1Q96RU3 617 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 NAP1L3Q99457 506 aaPredicted RBP8.15□□□□□ -1.11
CDKL5-202ENST00000379996 DPH5Q9H2P9 285 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 NXF3Q9H4D5 531 aaKnown RBP8.15□□□□□ -1.11
CDKL5-202ENST00000379996 SNTG2Q9NY99 539 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 KANSL3Q9P2N6 904 aa8.15□□□□□ -1.11
CDKL5-202ENST00000379996 TTC3P53804 2025 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 CSDE1O75534 798 aaKnown RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TCEA3O75764 348 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 VNN1O95497 513 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 CYP1A1P04798 512 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TNFAIP3P21580 790 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 RPL9P32969 192 aaKnown RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 COILP38432 576 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TMEM132DQ14C87 1099 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ARHGAP44Q17R89 818 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TCTN1Q2MV58 587 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 RASIP1Q5U651 963 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ICE2Q659A1 982 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 JADE1Q6IE81 842 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ANKS1BQ7Z6G8 1248 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 CCDC13Q8IYE1 715 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 CEP120Q8N960 986 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ADAM2Q99965 735 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 SAP130Q9H0E3 1048 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 CNOT10Q9H9A5 744 aaKnown RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 SLC12A4Q9UP95 1085 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TCRBV5S1A1TA0A578 114 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 PIRO00625 290 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 PTGESO14684 152 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ASS1P00966 412 aaKnown RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ACO1P21399 889 aaKnown RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 PNPLA4P41247 253 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 HLTFQ14527 1009 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TTC39CQ8N584 583 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ARFGAP2Q8N6H7 521 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF689Q96CS4 500 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 SEC16BQ96JE7 1060 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 BTBD6Q96KE9 485 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 XPO6Q96QU8 1125 aaKnown RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TMEM175Q9BSA9 504 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TRIM6Q9C030 488 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-202ENST00000379996 SEMA4AQ9H3S1 761 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 RAB20Q9NX57 234 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 UVRAGQ9P2Y5 699 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 PCNTO95613 3336 aa8.14□□□□□ -1.11
CDKL5-202ENST00000379996 TRIP11Q15643 1979 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 SMIM28A0A1B0GU29 152 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 TNNC2P02585 160 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 RARGP13631 454 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 ITGB8P26012 769 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 DSC1Q08554 894 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 AUHQ13825 339 aaKnown RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 IKBKEQ14164 716 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 SGSM1Q2NKQ1 1148 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 MON1BQ7L1V2 547 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 UBLCP1Q8WVY7 318 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 XYLT2Q9H1B5 865 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 RSAD1Q9HA92 442 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 AVENQ9NQS1 362 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 GDAP2Q9NXN4 497 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 PODXLO00592 558 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 CYP26A1O43174 497 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 EFEMP2O95967 443 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 NFICP08651 508 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 GBP1P32455 592 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 CYP2C18P33260 490 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 PTK6Q13882 451 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 ACAD10Q6JQN1 1059 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 PSRC1Q6PGN9 363 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 TNS4Q8IZW8 715 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms