RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TRIM66O15016 1216 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 DDX3YO15523 660 aaKnown RBP25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 CPB1P15086 417 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 ZNF143P52747 638 aaPredicted RBP25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 TUBB4BP68371 445 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 GPR17Q13304 367 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 DDX53Q86TM3 631 aaKnown RBP25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 HERC6Q8IVU3 1022 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 RHOT1Q8IXI2 618 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 ZMIZ2Q8NF64 920 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 MYRIPQ8NFW9 859 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 JOSD2Q8TAC2 188 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 SPPL2BQ8TCT7 592 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 ABHD8Q96I13 439 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 PSMB7Q99436 277 aa25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 ZMYND8Q9ULU4 1186 aaPredicted RBP25.79■■□□□ 1.72
ECHDC3-201ENST00000379215 DPYSL4O14531 572 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 HSF2BPO75031 334 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 TKTL1P51854 596 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 PTPROQ16827 1216 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 LRRC38Q5VT99 294 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 CREG2Q8IUH2 290 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 SCML4Q8N228 414 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 COG1Q8WTW3 980 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 CNPY3Q9BT09 278 aa25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 ABI2Q9NYB9 513 aaPredicted RBP25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 CXXC1Q9P0U4 656 aaPredicted RBP25.78■■□□□ 1.72
ECHDC3-201ENST00000379215 C2CD4BA6NLJ0 364 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 GABBR2O75899 941 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 ATP2A2P16615 1042 aaKnown RBP25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CXCR5P32302 372 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 GLUD2P49448 558 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 RWDD2BP57060 319 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 MRPS5P82675 430 aaKnown RBP25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 KRT17Q04695 432 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 PSMD5Q16401 504 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 RIN2Q8WYP3 895 aaPredicted RBP25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CAPZA3Q96KX2 299 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 B3GALT6Q96L58 329 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 KCNK16Q96T55 309 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 TRIM62Q9BVG3 475 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CARD6Q9BX69 1037 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CTAGE15A4D2H0 777 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 RNF8O76064 485 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 OR4Q2P0C623 313 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CTAGE8P0CG41 777 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 PDGFRAP16234 1089 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 SDC4P31431 198 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 GRIK1P39086 918 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 OGDHQ02218 1023 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 DSG1Q02413 1049 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CREMQ03060 361 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 ZNF252P-AS1Q0IIN9 211 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 SLC8B1Q6J4K2 584 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CTAGE6Q86UF2 777 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CTAGE4Q8IX94 777 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 SP7Q8TDD2 431 aaPredicted RBP25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 IRGQQ8WZA9 623 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 CLP1Q92989 425 aaKnown RBP25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 C8orf48Q96LL4 319 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 NAP1L3Q99457 506 aaPredicted RBP25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 NR2E3Q9Y5X4 410 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 VWA8A3KMH1 1905 aa25.77■■□□□ 1.72
ECHDC3-201ENST00000379215 HHLA1C9JL84 531 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 URODP06132 367 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 CACNA2D1P54289 1103 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 RNASE9P60153 205 aaKnown RBP25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 ADCY1Q08828 1119 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 HADHQ16836 314 aaKnown RBP25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 CC2D1AQ6P1N0 951 aaPredicted RBP25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 TAS1R1Q7RTX1 841 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 ZNF572Q7Z3I7 529 aaPredicted RBP25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 EMC1Q8N766 993 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 FBXO22Q8NEZ5 403 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 ACTRT1Q8TDG2 376 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 RXFP2Q8WXD0 754 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 TTC7AQ9ULT0 858 aaPredicted RBP25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 USTQ9Y2C2 406 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 SSX2IPQ9Y2D8 614 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 RWDD3Q9Y3V2 267 aa25.76■■□□□ 1.71
ECHDC3-201ENST00000379215 F8VP50 259 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 ZNF185O15231 689 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 PCK1P35558 622 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 SSR1P43307 286 aaKnown RBP25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 PEX5P50542 639 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 ITIH3Q06033 890 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 SEL1L2Q5TEA6 688 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 POLNQ7Z5Q5 900 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 GOLGA1Q92805 767 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 PIWIL1Q96J94 861 aaKnown RBP25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 VN1R3Q9BXE9 311 aa25.75■■□□□ 1.71
ECHDC3-201ENST00000379215 TLL1O43897 1013 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 CEP104O60308 925 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 DAB1O75553 588 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 ZBED1O96006 694 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 CYP2F1P24903 491 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 PTPN9P43378 593 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 RASGEF1CQ8N431 466 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 KRT35Q92764 455 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 CEP295NLQ96MC4 621 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms