RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 HS2ST1Q7LGA3 356 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 IL17RCQ8NAC3 791 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 KBTBD7Q8WVZ9 684 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 GATA6Q92908 595 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 ERLEC1Q96DZ1 483 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 FNBP1Q96RU3 617 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 PNKPQ96T60 521 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 GTPBP2Q9BX10 602 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 STRA6Q9BX79 667 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 TMEM121BQ9BXQ6 578 aaPredicted RBP18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 RNF38Q9H0F5 515 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 SLC32A1Q9H598 525 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 POLMQ9NP87 494 aaPredicted RBP18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 TMEM74BQ9NUR3 256 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 SEL1LQ9UBV2 794 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 CDH9Q9ULB4 789 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 PTPRJQ12913 1337 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 AKAP13Q12802 2813 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 F8VP50 259 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 PRPF6O94906 941 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 KAT7O95251 611 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 TNNC2P02585 160 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 TCF3P15923 654 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 GARTP22102 1010 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 P2RY2P41231 377 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 LYSMD4Q5XG99 296 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 GPD1LQ8N335 351 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 OR5B17Q8NGF7 314 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 PCED1BQ96HM7 432 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 SPATA17Q96L03 361 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 ARHGEF4Q9NR80 690 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 STK17AQ9UEE5 414 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 MBD1Q9UIS9 605 aaPredicted RBP18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 PCDHB13Q9Y5F0 798 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 CLIC4Q9Y696 253 aa18.98■□□□□ 0.63
PDLIM4-202ENST00000379018 TNRC6BQ9UPQ9 1833 aaKnown RBP18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 VPS37CA5D8V6 355 aaPredicted RBP18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 ZNF840PA6NDX5 716 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 SRRM3A6NNA2 597 aaPredicted RBP18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 TRIM66O15016 1216 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 ADH5P11766 374 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 ITPKAP23677 461 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 ATXN3P54252 364 aaPredicted RBP18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 SIM1P81133 766 aaPredicted RBP18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 EOGTQ5NDL2 527 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 VSTM1Q6UX27 236 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 SYT12Q8IV01 421 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 NAT16Q8N8M0 369 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 OLIG1Q8TAK6 271 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 DNAJC19Q96DA6 116 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 PANK2Q9BZ23 570 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 INTS13Q9NVM9 706 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 EVLQ9UI08 416 aaPredicted RBP18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 KLK13Q9UKR3 277 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 PCNX2A6NKB5 2137 aa18.97■□□□□ 0.63
PDLIM4-202ENST00000379018 SPEGQ15772 3267 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 TMEM8BA6NDV4 472 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 SLC9A3R1O14745 358 aaPredicted RBP18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 TNFRSF10BO14763 440 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 CLSTN1O94985 981 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 ADH1CP00326 375 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 TXLNAP40222 546 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 SLC7A9P82251 487 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 CEBPZQ03701 1054 aaKnown RBP18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 TAF10Q12962 218 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 MAPRE1Q15691 268 aaKnown RBP18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 BRAPQ7Z569 592 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 ADGRG2Q8IZP9 1017 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 OR6B3Q8NGW1 331 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 SNX25Q9H3E2 840 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 PANK4Q9NVE7 773 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 CEP192Q8TEP8 1941 aa18.96■□□□□ 0.63
PDLIM4-202ENST00000379018 ADAM23O75077 832 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 WASP42768 502 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 RPL6Q02878 288 aaKnown RBP18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 LY6G5CQ5SRR4 150 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 TDRD10Q5VZ19 366 aaKnown RBP18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 RHBDF2Q6PJF5 856 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 CBWD2Q8IUF1 395 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 HDDC3Q8N4P3 179 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 MYCBPAPQ8TBZ2 947 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 SLITRK1Q96PX8 696 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 EHD2Q9NZN4 543 aa18.95■□□□□ 0.62
PDLIM4-202ENST00000379018 ASPMQ8IZT6 3477 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 TBC1D3BA6NDS4 549 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 OAS1P00973 400 aaKnown RBP18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 IRF1P10914 325 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 PFKLP17858 780 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 WARSP23381 471 aaKnown RBP18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 STAT6P42226 847 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 GRIA2P42262 883 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 CACNA2D1P54289 1103 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 MAP7D1Q3KQU3 841 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 DPH6Q7L8W6 267 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 OR2I1PQ8NGU4 316 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 TTLL2Q9BWV7 592 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 ZNF518BQ9C0D4 1074 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms