RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PPFIBP2Q8ND30 876 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 EDEM1Q92611 657 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.77□□□□□ -0.047e-6■■■■■ 27.5
SHROOM1-203ENST00000378679 TRABDQ9H4I3 376 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 TRPC7Q9HCX4 862 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 ST3GAL5Q9UNP4 418 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 SKAP2O75563 359 aaPredicted RBP14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 F9P00740 461 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 YWHAZP63104 245 aaKnown RBP14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 PRAMEP78395 509 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 PDK2Q15119 407 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 NFE2Q16621 373 aaPredicted RBP14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 WSCD1Q658N2 575 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 PALB2Q86YC2 1186 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 PPIL6Q8IXY8 311 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 C4orf33Q8N1A6 199 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 HELQQ8TDG4 1101 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 PCDHB18PQ96TA0 734 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 KLC4Q9NSK0 619 aa14.77□□□□□ -0.04
SHROOM1-203ENST00000378679 ARHGAP42A6NI28 874 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 EIF3HO15372 352 aaKnown RBP eCLIP14.77□□□□□ -0.052e-6■■■□□ 15.9
SHROOM1-203ENST00000378679 ALDH2P05091 517 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 CCDC130P13994 396 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 MIPP30301 263 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 NOMO3P69849 1222 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 MRPS6P82932 125 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 MAMLD1Q13495 774 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 CHSY1Q86X52 802 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 NWD2Q9ULI1 1742 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 TAF1P21675 1872 aa14.77□□□□□ -0.05
SHROOM1-203ENST00000378679 GOLGA8CPA6NN73 597 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 DARSP14868 501 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 CRYBB1P53674 252 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 COPS2P61201 443 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 RPL7AP62424 266 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 LLGL2Q6P1M3 1020 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 MYLK4Q86YV6 388 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 HDAC11Q96DB2 347 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 FIS1Q9Y3D6 152 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 A0A0G2JND7 137 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 ENO4A6NNW6 628 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 B4GALT4O60513 344 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 SLC8A1P32418 973 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 TSHZ1Q6ZSZ6 1077 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 LMNTD2Q8IXW0 634 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 MAML1Q92585 1016 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 TTC1Q99614 292 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 PFDN4Q9NQP4 134 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 DSEQ9UL01 958 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 CES2O00748 559 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 MEFVO15553 781 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 C4BPAP04003 597 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 YBX3P16989 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 MDH1P40925 334 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 RECQLP46063 649 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 KPNA2P52292 529 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 ATP13A4Q4VNC1 1196 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 LPPQ93052 612 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 CCT8L2Q96SF2 557 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 ALG13Q9NP73 1137 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 ATP11BQ9Y2G3 1177 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 RARGP13631 454 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 GRM5P41594 1212 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 DAB2IPQ5VWQ8 1189 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 AP1ARQ63HQ0 302 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 RMDN1Q96DB5 314 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 KLF6Q99612 283 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 MAGEB5Q9BZ81 275 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 PIDD1Q9HB75 910 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 UBN1Q9NPG3 1134 aa14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 G3BP2Q9UN86 482 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-203ENST00000378679 UMODL1Q5DID0 1318 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 TMEM88BA6NKF7 163 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 CYP1A2P05177 515 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 CD52P31358 61 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 AMPD2Q01433 879 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 SNX17Q15036 470 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ATG16L1Q676U5 607 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 TFB1MQ8WVM0 346 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 CHMP6Q96FZ7 201 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 PGLYRP2Q96PD5 576 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 CHST7Q9NS84 486 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 SENP1Q9P0U3 644 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 SALL4Q9UJQ4 1053 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 MID2Q9UJV3 735 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 SMIM35A0A1B0GVV1 85 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 FBXO21O94952 628 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ZNF449Q6P9G9 518 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 DEFB106AQ8N104 65 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ADAM32Q8TC27 787 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 FBXO32Q969P5 355 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 TGS1Q96RS0 853 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 SEMA4AQ9H3S1 761 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 CATSPERBQ9H7T0 1116 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 MUM1Q2TAK8 710 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 RNF219Q5W0B1 726 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ELMSAN1Q6PJG2 1045 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms