RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TUT1Q9H6E5 874 aaKnown RBP16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 CYP4F11Q9HBI6 524 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 POMPQ9Y244 141 aa16.33■□□□□ 0.21
CSNK1A1-202ENST00000377843 PLIN4Q96Q06 1357 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 CRTAMO95727 393 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 CYP3A4P08684 503 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 SSTR3P32745 418 aaPredicted RBP16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 PHBP35232 272 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 MLH1P40692 756 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 ALDH1A3P47895 512 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 CCR3P51677 355 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 VCPP55072 806 aaKnown RBP16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 GDF10P55107 478 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 TMPRSS15P98073 1019 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 FAM182AQ5T1J6 154 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 SLC15A3Q8IY34 581 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 CDH22Q9UJ99 828 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 MAD1L1Q9Y6D9 718 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 SDR42E2A6NKP2 422 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 PEX1O43933 1283 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 PROCP04070 461 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 SERPINA6P08185 405 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 AOC1P19801 751 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 CHI3L2Q15782 390 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 HSPBP1Q9NZL4 362 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 SEL1LQ9UBV2 794 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZNF180Q9UJW8 692 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 HBS1LQ9Y450 684 aaKnown RBP16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
CSNK1A1-202ENST00000377843 A0A0B4J269 797 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 K7ENM7 598 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 SGK1O00141 431 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TMEM63AO94886 807 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 KRT5P13647 590 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TUBB3Q13509 450 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 BBS9Q3SYG4 887 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TBC1D10BQ4KMP7 808 aaPredicted RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 DNAJC14Q6Y2X3 702 aaPredicted RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 MAML3Q96JK9 1138 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 SLITRK1Q96PX8 696 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZNF696Q9H7X3 374 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 SAE1Q9UBE0 346 aaPredicted RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 PDGFRBP09619 1106 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 KBTBD12Q3ZCT8 623 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TXNRD3NBQ6F5E7 133 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 DRICH1Q6PGQ1 229 aaPredicted RBP16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 POTEAQ6S8J7 498 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 AMIGO2Q86SJ2 522 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TAS1R2Q8TE23 839 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 POMGNT1Q8WZA1 660 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TMIGD2Q96BF3 282 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 TBCCD1Q9NVR7 557 aa16.32■□□□□ 0.2
CSNK1A1-202ENST00000377843 KANSL1LA0AUZ9 987 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 I3L4J1 428 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 TFPTP0C1Z6 253 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 SRGAP2BP0DMP2 458 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 RBP3P10745 1247 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 PORP16435 677 aaPredicted RBP16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 DSG3P32926 999 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 ANKDD1AQ495B1 522 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 ZCCHC23Q6ZST2 131 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 STXBP4Q6ZWJ1 553 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 MON1BQ7L1V2 547 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 CBWD2Q8IUF1 395 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 PALM2Q8IXS6 379 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 ALDH16A1Q8IZ83 802 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 NAT8LQ8N9F0 302 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 E2F7Q96AV8 911 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 PI4K2AQ9BTU6 479 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 AP4B1Q9Y6B7 739 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 TM4SF1P30408 202 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 SREBF1P36956 1147 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 GABPAQ06546 454 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 KRT81Q14533 505 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 HSP90AA5PQ58FG0 334 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 OTOP1Q7RTM1 612 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 MMP19Q99542 508 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 PCDH9Q9HC56 1237 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 PACSIN3Q9UKS6 424 aa16.31■□□□□ 0.2
CSNK1A1-202ENST00000377843 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 CDK5RAP2Q96SN8 1893 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 RGL2O15211 777 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ADCY3O60266 1144 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 LDHCP07864 332 aa16.3■□□□□ 0.2
CSNK1A1-202ENST00000377843 ALOX15P16050 662 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms