RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 MYO1HQ8N1T3 1032 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 C1orf54Q8WWF1 131 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 FAM120BQ96EK7 910 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 ZNF333Q96JL9 665 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 MMP19Q99542 508 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 CLPBQ9H078 707 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ELOVL6Q9H5J4 265 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 EFCAB1Q9HAE3 211 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 A0A0D9SFI3 127 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PNMA6EA0A0J9YXQ4 647 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 TCP11X1B4DZS4 312 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PSTPIP1O43586 416 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ZNF682O95780 498 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 HIST1H2ABP04908 130 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 CKMP06732 381 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ETFBP38117 255 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PEX5P50542 639 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 MRPS25P82663 173 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 PPIDQ08752 370 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 SMCO1Q147U7 214 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 C10orf120Q5SQS8 335 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PRMT9Q6P2P2 845 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 HIST3H2AQ7L7L0 130 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 GAS2L3Q86XJ1 694 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ANKMY2Q8IV38 441 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 LCORLQ8N3X6 602 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 RNF149Q8NC42 400 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 EEF1AKMT1Q8WVE0 214 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 HIST1H2ACQ93077 130 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 RBM15Q96T37 977 aaKnown RBP eCLIP10.99□□□□□ -0.654e-7■■■□□ 16.7
RTN3-206ENST00000377819 ACAD9Q9H845 621 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 TMEM138Q9NPI0 162 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PCMTD2Q9NV79 361 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PSMC3IPQ9P2W1 217 aaPredicted RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 PRKAG3Q9UGI9 489 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 TMEM114B3SHH9 223 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 TEX46H3BTG2 121 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ITGA3P26006 1051 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PTPN3P26045 913 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ALDH7A1P49419 539 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 PDX1P52945 283 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 FAM83BQ5T0W9 1011 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 SLC13A5Q86YT5 568 aaPredicted RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 LRRC71Q8N4P6 559 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 TFB1MQ8WVM0 346 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 ZNF669Q96BR6 464 aaPredicted RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 AHCYL2Q96HN2 611 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 ZNF668Q96K58 619 aaPredicted RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 FEM1BQ9UK73 627 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PCDHA6Q9UN73 950 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 CRYL1Q9Y2S2 319 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PCDHA8Q9Y5H6 950 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 NCKAP5LQ9HCH0 1330 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 ARHGEF28Q8N1W1 1705 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 ASNA1O43681 348 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 MFAP3LO75121 409 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 VPS4BO75351 444 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 HLA-DQA2P01906 255 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PNMA6AP0CW24 399 aaPredicted RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 PLIN5Q00G26 463 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 SPP2Q13103 211 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PLA2G4FQ68DD2 849 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PLEKHA7Q6IQ23 1121 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 GATAD2AQ86YP4 633 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
RTN3-206ENST00000377819 CAB39LQ9H9S4 337 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 PDP2Q9P2J9 529 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 A2MP01023 1474 aa10.99□□□□□ -0.65
RTN3-206ENST00000377819 A0A0X1KG70 313 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 CPSF4O95639 269 aaKnown RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 MMP1P03956 469 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 SRP54P61011 504 aaKnown RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 PTSQ03393 145 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 TAF1CQ15572 869 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 KNOP1Q1ED39 458 aaKnown RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 MARK2Q7KZI7 788 aaKnown RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 ATP6V0D2Q8N8Y2 350 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 DCAF4Q8WV16 495 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 EAF2Q96CJ1 260 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 REXO5Q96IC2 774 aaKnown RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 ACTR8Q9H981 624 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 SLC35C2Q9NQQ7 365 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 MARK1Q9P0L2 795 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 DUSP12Q9UNI6 340 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 CHKBQ9Y259 395 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 WEE2P0C1S8 567 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 ATP6V1B2P21281 511 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 PDIA6Q15084 440 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 POLR3FQ9H1D9 316 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 GSTK1Q9Y2Q3 226 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 NOS1P29475 1434 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 WRBO00258 174 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 DGKIO75912 1065 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 APOC1P02654 83 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 PSMB9P28065 219 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms