RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 CHRNA1P02708 482 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 PROZP22891 400 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 GSTT1P30711 240 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 HOXA11P31270 313 aaPredicted RBP15.38■□□□□ 0.05
UBA1-202ENST00000377269 FOXN2P32314 431 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 VAMP7P51809 220 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 PPP3CAQ08209 521 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
UBA1-202ENST00000377269 DHX38Q92620 1227 aaKnown RBP15.38■□□□□ 0.05
UBA1-202ENST00000377269 NDNQ99608 321 aa15.38■□□□□ 0.05
UBA1-202ENST00000377269 CDC42EP4Q9H3Q1 356 aaKnown RBP15.38■□□□□ 0.05
UBA1-202ENST00000377269 EXTL3O43909 919 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 B4GALT4O60513 344 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 DCTN3O75935 186 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 DLATP10515 647 aaKnown RBP15.37■□□□□ 0.05
UBA1-202ENST00000377269 THPOP40225 353 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 GCLMP48507 274 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 FAM187BQ17R55 369 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 SNX30Q5VWJ9 437 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 SLFN12LQ6IEE8 588 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 FBXO46Q6PJ61 603 aaPredicted RBP15.37■□□□□ 0.05
UBA1-202ENST00000377269 PPP1R21Q6ZMI0 780 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 PDZD7Q9H5P4 517 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 ATXN10Q9UBB4 475 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 OGDHLQ9ULD0 1010 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 CDY2AQ9Y6F7 541 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 CNTNAP2Q9UHC6 1331 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 PTPN4P29074 926 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 MCL1Q07820 350 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 CYP24A1Q07973 514 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 KHDC1Q4VXA5 237 aaKnown RBP15.37■□□□□ 0.05
UBA1-202ENST00000377269 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 C4orf50Q6ZRC1 276 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 CATSPER4Q7RTX7 472 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 LNX1Q8TBB1 728 aaPredicted RBP15.37■□□□□ 0.05
UBA1-202ENST00000377269 PLEKHG4BQ96PX9 1271 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 CDT1Q9H211 546 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 SIX2Q9NPC8 291 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 NKIRAS1Q9NYS0 192 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 NOD1Q9Y239 953 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 TNFSF13BQ9Y275 285 aa15.37■□□□□ 0.05
UBA1-202ENST00000377269 MRPS6P82932 125 aaKnown RBP15.36■□□□□ 0.05
UBA1-202ENST00000377269 CCDC137Q6PK04 289 aaKnown RBP15.36■□□□□ 0.05
UBA1-202ENST00000377269 NME8Q8N427 588 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 NRG4Q8WWG1 115 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 SCG3Q8WXD2 468 aaKnown RBP15.36■□□□□ 0.05
UBA1-202ENST00000377269 MFSD14AQ96MC6 490 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 GBP5Q96PP8 586 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 CCDC28BQ9BUN5 200 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 VCX3BQ9H321 246 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 VCX3AQ9NNX9 186 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 AAASQ9NRG9 546 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 LNPEPQ9UIQ6 1025 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 ACTL7BQ9Y614 415 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 SETSIPP0DME0 302 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 CYP1B1Q16678 543 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 GSTA3Q16772 222 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 CCNJLQ8IV13 435 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 ZDHHC14Q8IZN3 488 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 ELMO3Q96BJ8 720 aa15.36■□□□□ 0.05
UBA1-202ENST00000377269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.057e-7■■■■■ 34.8
UBA1-202ENST00000377269 AJAP1Q9UKB5 411 aaPredicted RBP15.36■□□□□ 0.05
UBA1-202ENST00000377269 PTPRJQ12913 1337 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 HNRNPCL1O60812 293 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 SERPINB4P48594 390 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 FMO5P49326 533 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 CRYBB1P53674 252 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 ATN1P54259 1190 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 CDC42EP1Q00587 391 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 IL9RQ01113 521 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 MYBPC3Q14896 1274 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 KPNB1Q14974 876 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 SCARA3Q6AZY7 606 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 SLC43A3Q8NBI5 491 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 SENP6Q9GZR1 1112 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 OCEL1Q9H607 264 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 RBAKQ9NYW8 714 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 TMCO1Q9UM00 188 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 G3BP2Q9UN86 482 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 LAMA2P24043 3122 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 ACSL3O95573 720 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 FAM163BP0C2L3 166 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 ZRSR2Q15696 482 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 CCDC6Q16204 474 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 RGS9BPQ6ZS82 235 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 FAM47EQ6ZV65 393 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 TMEM130Q8N3G9 435 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 DIS3LQ8TF46 1054 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 CTNNBL1Q8WYA6 563 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 NR1H4Q96RI1 486 aaPredicted RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 EIF2AQ9BY44 585 aaKnown RBP15.35■□□□□ 0.05
UBA1-202ENST00000377269 HES2Q9Y543 173 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 SIP14410 1827 aa15.35■□□□□ 0.05
UBA1-202ENST00000377269 FOXO6A8MYZ6 492 aa15.34■□□□□ 0.05
UBA1-202ENST00000377269 MIF4GDA9UHW6 222 aaKnown RBP15.34■□□□□ 0.05
UBA1-202ENST00000377269 ARVCFO00192 962 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms