RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TAF11Q15544 211 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 Q3C1V9 767 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 MROH9Q5TGP6 573 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 TMEM176AQ96HP8 235 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 RAB3IPQ96QF0 476 aaPredicted RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ENTPD5O75356 428 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 HMGCRP04035 888 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 RBL1P28749 1068 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 CRADDP78560 199 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ATXN7L3BQ96GX2 97 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 FAM167AQ96KS9 214 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 CYTH2Q99418 400 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 TSSK1BQ9BXA7 367 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 NIFKQ9BYG3 293 aaKnown RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 TSPAN16Q9UKR8 245 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ADGRA2Q96PE1 1338 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 A0A1B0GUA9 196 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ACKR2O00590 384 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 COPEO14579 308 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 HCRTO43612 131 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 UNC5CO95185 931 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ITGAVP06756 1048 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 FGFR1P11362 822 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ATXN1P54253 815 aaKnown RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ZNF200P98182 395 aaPredicted RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 XYLT1Q86Y38 959 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 ARMC2Q8NEN0 867 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 DCPSQ96C86 337 aaKnown RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 MMP19Q99542 508 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 MPHOSPH6Q99547 160 aaKnown RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 TRIM55Q9BYV6 548 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 MRPL42Q9Y6G3 142 aaKnown RBP13.5□□□□□ -0.25
USP11-204ENST00000377107 DCTN3O75935 186 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 ARFIP2P53365 341 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 AP3M2P53677 418 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 SURF1Q15526 300 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 KIZQ2M2Z5 673 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 GOLGA7BQ2TAP0 167 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 KLHL38Q2WGJ6 581 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 LBX2Q6XYB7 198 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 PCGF5Q86SE9 256 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 GRAMD1AQ96CP6 724 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 GPR20Q99678 358 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 XYLT2Q9H1B5 865 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP11-204ENST00000377107 ZC3H7BQ9UGR2 993 aaKnown RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP11-204ENST00000377107 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 PEX19P40855 299 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 TAP1Q03518 808 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 TMEM132DQ14C87 1099 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 RIBC1Q8N443 379 aaPredicted RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 SLC4A11Q8NBS3 891 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 TTC8Q8TAM2 541 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 TMEM174Q8WUU8 243 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 TRIM6Q9C030 488 aaPredicted RBP13.49□□□□□ -0.25
USP11-204ENST00000377107 C2orf40Q9H1Z8 148 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 PCMTD2Q9NV79 361 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 KLK14Q9P0G3 267 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 SIX4Q9UIU6 781 aa13.49□□□□□ -0.25
USP11-204ENST00000377107 P4HA1P13674 534 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 GPD1P21695 349 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 SERPINB3P29508 390 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 PDK4Q16654 411 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 ZCCHC23Q6ZST2 131 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 CCNYQ8ND76 341 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 SLC35B2Q8TB61 432 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 FAM172AQ8WUF8 416 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 PTPRN2Q92932 1015 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 TBC1D10AQ9BXI6 508 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 HESX1Q9UBX0 185 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 DRG1Q9Y295 367 aaKnown RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 CENPFP49454 3210 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 KIF13BQ9NQT8 1826 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 UGT1A9O60656 530 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 NPTXRO95502 500 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 CYP2C8P10632 490 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 SDC4P31431 198 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 SLC25A11Q02978 314 aaKnown RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 MAP1SQ66K74 1059 aaPredicted RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 PPP1R2P3Q6NXS1 205 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 FAM183BPQ6ZVS7 135 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 BBS12Q6ZW61 710 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 NKD2Q969F2 451 aaPredicted RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 PEBP4Q96S96 227 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 ZNF518BQ9C0D4 1074 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 UGT1A7Q9HAW7 530 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms