RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KBTBD2Q8IY47 623 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 ARFGAP1Q8N6T3 406 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 PDCD7Q8N8D1 485 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 NMUR2Q9GZQ4 415 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 ZNF395Q9H8N7 513 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 CNTN6Q9UQ52 1028 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 LRCH1Q9Y2L9 728 aa14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 MTO1Q9Y2Z2 717 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-202ENST00000375692 KAT6AQ92794 2004 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 AP1G2O75843 785 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 DGAT1O75907 488 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 EDN1P05305 212 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 ETV4P43268 484 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 BASP1P80723 227 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 PTK7Q13308 1070 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 BIRC2Q13490 618 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 ZC3H12AQ5D1E8 599 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 PCGF5Q86SE9 256 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 KIAA0319LQ8IZA0 1049 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 STMN2Q93045 179 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 OXNAD1Q96HP4 312 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 ADAMTS5Q9UNA0 930 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 OTOFQ9HC10 1997 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 SCN4AP35499 1836 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 ABLIM1O14639 778 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 AVILO75366 819 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 CALB1P05937 261 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 SKIP12755 728 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 PGM1P36871 562 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 ELK3P41970 407 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 OCRLQ01968 901 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 PRKCEQ02156 737 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 KBTBD12Q3ZCT8 623 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 PPP1R15BQ5SWA1 713 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 FOXB2Q5VYV0 432 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 CDHR3Q6ZTQ4 885 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 MCPH1Q8NEM0 835 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 TFAP2BQ92481 460 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 MSTO1Q9BUK6 570 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 MECRQ9BV79 373 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 ARHGEF4Q9NR80 690 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 FETUBQ9UGM5 382 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 FBXO40Q9UH90 709 aa14.75□□□□□ -0.05
CLCNKA-202ENST00000375692 DNAJC6O75061 913 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 WEE2P0C1S8 567 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 DHRS4L1P0CG22 281 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 RARBP10826 455 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 TBXAS1P24557 533 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 NEK3P51956 506 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 ZNF132P52740 706 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 BAATQ14032 418 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 PIGHQ14442 188 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 TAF5Q15542 800 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 LDLRAD1Q5T700 205 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 CCDC62Q6P9F0 684 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 DDX50Q9BQ39 737 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 TUBB6Q9BUF5 446 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 KRT82Q9NSB4 513 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 DDX56Q9NY93 547 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 PCSK1NQ9UHG2 260 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 RLFQ13129 1914 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 TCRBV9S1A1TA0A576 114 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 LRRIQ4A6NIV6 560 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 B2RBV5 119 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 E7ESA3 106 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 PSMA2P25787 234 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 PTPN7P35236 360 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 NBPF20Q3BBV1 942 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 HSF5Q4G112 596 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 PRPF39Q86UA1 669 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 TREML1Q86YW5 311 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 ATP6V0A1Q93050 837 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 ALKBH8Q96BT7 664 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 CLPTM1LQ96KA5 538 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 FAM161BQ96MY7 647 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 CYTH2Q99418 400 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 VCXQ9H320 206 aa14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 STX18Q9P2W9 335 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-202ENST00000375692 CNTNAP2Q9UHC6 1331 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 A0A0G2JLL6 359 aaPredicted RBP14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 KBTBD13C9JR72 458 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 ENO1P06733 434 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 YWHAGP61981 247 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 ENPEPQ07075 957 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 AP1B1Q10567 949 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SCARA5Q6ZMJ2 495 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SH2D5Q6ZV89 423 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 PRRT2Q7Z6L0 340 aaPredicted RBP14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 EMC1Q8N766 993 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 TMEM35BQ8NCS4 154 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 RNF146Q9NTX7 359 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 HOXC10Q9NYD6 342 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
CLCNKA-202ENST00000375692 SCOCQ9UIL1 159 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms