RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CLRN2A0PK11 232 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FCHO1O14526 889 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 TGM6O95932 706 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 PRR29P0C7W0 189 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ZNF24P17028 368 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 PSMB9P28065 219 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 STOX1Q6ZVD7 989 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 IQCKQ8N0W5 287 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ACSBG1Q96GR2 724 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MAF1Q9H063 256 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.83□□□□□ -1.325e-7■□□□□ 11
UBR4-204ENST00000375254 SFNP31947 248 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CYP4F2P78329 520 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CYP4F3Q08477 520 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ASB2Q96Q27 587 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 YME1L1Q96TA2 773 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 HIPK3Q9H422 1215 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MOSPD1Q9UJG1 213 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 SSR3Q9UNL2 185 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 UBE3AQ05086 875 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MTERF2Q49AM1 385 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 WDR49Q8IV35 697 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ZNF420Q8TAQ5 688 aaPredicted RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 TRIM62Q9BVG3 475 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 NCKIPSDQ9NZQ3 722 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ZMAT5Q9UDW3 170 aaKnown RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 GMFGO60234 142 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 STX4Q12846 297 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FAM76BQ5HYJ3 339 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CASKIN2Q8WXE0 1202 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MUC13Q9H3R2 512 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 GTSE1Q9NYZ3 720 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CHP2O43745 196 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ZNF284Q2VY69 593 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CCNYL2Q5T2Q4 361 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 AGAP9Q5VTM2 703 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 DPP10Q8N608 796 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ZNF185O15231 689 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ERAP2Q6P179 960 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FCGR1BQ92637 280 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 IRAK3Q9Y616 596 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 SBNO2Q9Y2G9 1366 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 SMARCA2P51531 1590 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ABCC4O15439 1325 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 RASA1P20936 1047 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FOXR1Q6PIV2 292 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CREB3L1Q96BA8 519 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 NUDT2P50583 147 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ACTR2P61160 394 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 NUDT5Q9UKK9 219 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CYP2D6P10635 497 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CCNG1P51959 295 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 TPTEP56180 551 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ACVR2BQ13705 512 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FBXO43Q4G163 708 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 PQLC1Q8N2U9 271 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MYLPFQ96A32 169 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FAM149B1Q96BN6 582 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 S100PBPQ96BU1 408 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 OXNAD1Q96HP4 312 aaPredicted RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 PDGFCQ9NRA1 345 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 VPS54Q9P1Q0 977 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 SLC9A2Q9UBY0 812 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CYP11B2P19099 503 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MYL12AP19105 171 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 FGFR4P22455 802 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CDK9P50750 372 aaKnown RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 PSME3P61289 254 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 MAPK11Q15759 364 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ODR4Q5SWX8 454 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ACTRT2Q8TDY3 377 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 C17orf80Q9BSJ5 609 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 NUP85Q9BW27 656 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 EMILIN2Q9BXX0 1053 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 TMEM5Q9Y2B1 443 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 KIAA0391O15091 583 aaKnown RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 OR7A10O76100 309 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ETV1P50549 477 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 PTH1RQ03431 593 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 TNK2Q07912 1038 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 SLC12A1Q13621 1099 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CACHD1Q5VU97 1274 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 SLC22A9Q8IVM8 553 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CCNYQ8ND76 341 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 VANGL1Q8TAA9 524 aaPredicted RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 GLG1Q92896 1179 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 POLR1BQ9H9Y6 1135 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 TRPV5Q9NQA5 729 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ABCB10Q9NRK6 738 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 TMCC3Q9ULS5 477 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 NPTX2P47972 431 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ROR1Q01973 937 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CCNG2Q16589 344 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 BORAQ6PGQ7 559 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 OR8H3Q8N146 312 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 NRBP2Q9NSY0 501 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 TOR4AQ9NXH8 423 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 PSMD13Q9UNM6 376 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms