RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TTC13Q8NBP0 860 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 PLEKHO2Q8TD55 490 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 WDR83Q9BRX9 315 aaKnown RBP21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 POMPQ9Y244 141 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 THSD7AQ9UPZ6 1657 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 CYP3A7-CYP3A51PA0A087WV96 503 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 SERPINA6P08185 405 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 TFPTP0C1Z6 253 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 POLR2MP0CAP2 368 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 CYP3A7P24462 503 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 IRX4P78413 519 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 TMPRSS15P98073 1019 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 ALCAMQ13740 583 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 C16orf72Q14CZ0 275 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 CNGA3Q16281 694 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 KLHL38Q2WGJ6 581 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 KCTD21Q4G0X4 260 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 PDCD4Q53EL6 469 aaKnown RBP21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 PGM2L1Q6PCE3 622 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 CDHR3Q6ZTQ4 885 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 JADE3Q92613 823 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 PARVGQ9HBI0 331 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 CYP4F11Q9HBI6 524 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 DOLKQ9UPQ8 538 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 AP4B1Q9Y6B7 739 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 CCDC195A0A1B0GUA6 201 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 RBP3P10745 1247 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 VAMP7P51809 220 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 NR1H2P55055 460 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 TBCCQ15814 346 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 OLFML1Q6UWY5 402 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 SH2D5Q6ZV89 423 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 HPS6Q86YV9 775 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 ATP11CQ8NB49 1132 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 DDI1Q8WTU0 396 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 ELMO3Q96BJ8 720 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 C7orf26Q96N11 449 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 Q9H521 79 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 THEGQ9P2T0 379 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 NFASCO94856 1347 aa21.43■■□□□ 1.02
TMEFF1-201ENST00000374879 TISP43B9A030 160 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PI4K2BG5E9Z4 385 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PROCP04070 461 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 HLA-DOAP06340 250 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PFKPQ01813 784 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SLC15A2Q16348 729 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 ANKDD1AQ495B1 522 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 ZNF362Q5T0B9 420 aaPredicted RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 C1orf220Q5T0J3 134 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 CDC42EP5Q6NZY7 148 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 POTEHQ6S545 545 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 AMIGO2Q86SJ2 522 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 FAM178BQ8IXR5 827 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 DDX1Q92499 740 aaKnown RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 KCNN1Q92952 543 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 MBOAT7Q96N66 472 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 UNC45AQ9H3U1 944 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PLGRKTQ9HBL7 147 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 RSL24D1Q9UHA3 163 aaKnown RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 CDH22Q9UJ99 828 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 TMEM98Q9Y2Y6 226 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 HBS1LQ9Y450 684 aaKnown RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 A0A1B0GTW7 788 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 HDAC4P56524 1084 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SLC18A2Q05940 514 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 FAAP100Q0VG06 881 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 CLEC16AQ2KHT3 1053 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 QRICH1Q2TAL8 776 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 OGFOD1Q8N543 542 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PPP4R1Q8TF05 950 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 ZC3H12CQ9C0D7 883 aaKnown RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PPME1Q9Y570 386 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PCDHA1Q9Y5I3 950 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SF3B1O75533 1304 aaKnown RBP eCLIP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 WDR46O15213 610 aaKnown RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 IFNB1P01574 187 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 AOC1P19801 751 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 RXRGP48443 463 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 NFIAQ12857 509 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PTP4A2Q12974 167 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 PTK7Q13308 1070 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 DOK7Q18PE1 504 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 ATP13A4Q4VNC1 1196 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 DENND5BQ6ZUT9 1274 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 C1orf186Q6ZWK4 172 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 RHPN2Q8IUC4 686 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SP8Q8IXZ3 490 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 FBXO36Q8NEA4 188 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SHC3Q92529 594 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 TMIGD2Q96BF3 282 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 EIF2AK1Q9BQI3 630 aaKnown RBP21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SHCBP1LQ9BZQ2 653 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 C20orf27Q9GZN8 174 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 RRN3Q9NYV6 651 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 SHOC2Q9UQ13 582 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 USTQ9Y2C2 406 aa21.42■■□□□ 1.02
TMEFF1-201ENST00000374879 FBP2O00757 339 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 ITM2AO43736 263 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 CBFA2T3O75081 653 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms