RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ZNF699Q32M78 642 aa16.34■□□□□ 0.21
CCDC40-202ENST00000374876 PAN2Q504Q3 1202 aaKnown RBP16.34■□□□□ 0.21
CCDC40-202ENST00000374876 ZNF394Q53GI3 561 aa16.34■□□□□ 0.21
CCDC40-202ENST00000374876 MPZL3Q6UWV2 235 aa16.34■□□□□ 0.21
CCDC40-202ENST00000374876 MICALCLQ6ZW33 695 aa16.34■□□□□ 0.21
CCDC40-202ENST00000374876 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
CCDC40-202ENST00000374876 ELAC1Q9H777 363 aaKnown RBP16.34■□□□□ 0.21
CCDC40-202ENST00000374876 TNFSF13BQ9Y275 285 aa16.34■□□□□ 0.21
CCDC40-202ENST00000374876 R3HDM2Q9Y2K5 976 aaKnown RBP16.34■□□□□ 0.21
CCDC40-202ENST00000374876 PCDHA11Q9Y5I1 949 aa16.34■□□□□ 0.21
CCDC40-202ENST00000374876 ABLIM1O14639 778 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 TRAPPC3O43617 180 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 ZNF623O75123 536 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 TNNC2P02585 160 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 PAEPP09466 180 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.21
CCDC40-202ENST00000374876 ADCY8P40145 1251 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 CAV1Q03135 178 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 TRIP13Q15645 432 aaPredicted RBP16.33■□□□□ 0.21
CCDC40-202ENST00000374876 CCNG2Q16589 344 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 SPRED2Q7Z698 418 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 THNSL1Q8IYQ7 743 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 TMEM35BQ8NCS4 154 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 ZNF689Q96CS4 500 aaPredicted RBP16.33■□□□□ 0.21
CCDC40-202ENST00000374876 TMEM109Q9BVC6 243 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 STMN4Q9H169 189 aaPredicted RBP16.33■□□□□ 0.21
CCDC40-202ENST00000374876 PTPRHQ9HD43 1115 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 RNF19AQ9NV58 838 aa16.33■□□□□ 0.21
CCDC40-202ENST00000374876 TMEM191CA6NGB0 347 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 TBKBP1A7MCY6 615 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 KIAA0754O94854 1291 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 WEE2P0C1S8 567 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 SKIP12755 728 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 AKAP5P24588 427 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 RAB27AP51159 221 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 OSTNP61366 133 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 RPL7AP62424 266 aaKnown RBP16.33■□□□□ 0.2
CCDC40-202ENST00000374876 RAB30Q15771 203 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 CLLU1OSQ5K130 101 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 UBAP2Q5T6F2 1119 aaKnown RBP16.33■□□□□ 0.2
CCDC40-202ENST00000374876 DNAJC24Q6P3W2 148 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 AGMOQ6ZNB7 445 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 MRPL10Q7Z7H8 261 aaKnown RBP16.33■□□□□ 0.2
CCDC40-202ENST00000374876 EPS8L3Q8TE67 593 aaKnown RBP16.33■□□□□ 0.2
CCDC40-202ENST00000374876 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 ADPGKQ9BRR6 497 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 CEP83Q9Y592 693 aa16.33■□□□□ 0.2
CCDC40-202ENST00000374876 RASGRF2O14827 1237 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 TP73O15350 636 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 AGTP01019 485 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 PROZP22891 400 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 AFF1P51825 1210 aaKnown RBP16.32■□□□□ 0.2
CCDC40-202ENST00000374876 ITGA8P53708 1063 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 DCUN1D2Q6PH85 259 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 C3orf20Q8ND61 904 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 TIFAQ96CG3 184 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 MCEEQ96PE7 176 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 ZNF518BQ9C0D4 1074 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
CCDC40-202ENST00000374876 CERS4Q9HA82 394 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 SLC28A3Q9HAS3 691 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 RC3H2Q9HBD1 1191 aaKnown RBP16.32■□□□□ 0.2
CCDC40-202ENST00000374876 SNTG2Q9NY99 539 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 ANAPC5Q9UJX4 755 aa16.32■□□□□ 0.2
CCDC40-202ENST00000374876 IVDP26440 423 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 SLCO1A2P46721 670 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 YWHAEP62258 255 aaKnown RBP16.31■□□□□ 0.2
CCDC40-202ENST00000374876 BTG3Q14201 252 aaPredicted RBP16.31■□□□□ 0.2
CCDC40-202ENST00000374876 RHBDF2Q6PJF5 856 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 RCOR2Q8IZ40 523 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 CEP120Q8N960 986 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 CCDC89Q8N998 374 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 MDM1Q8TC05 714 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 RBM41Q96IZ5 413 aaKnown RBP16.31■□□□□ 0.2
CCDC40-202ENST00000374876 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 SELENOSQ9BQE4 189 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 CDT1Q9H211 546 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 KLHL11Q9NVR0 708 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 INPP5FQ9Y2H2 1132 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 ATXN2Q99700 1313 aaKnown RBP16.31■□□□□ 0.2
CCDC40-202ENST00000374876 A0A087WUV0 522 aaPredicted RBP16.31■□□□□ 0.2
CCDC40-202ENST00000374876 LINC01553A4QN01 128 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 ACSL3O95573 720 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 ASPAP45381 313 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 VPS41P49754 854 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 IFI35P80217 286 aaPredicted RBP16.31■□□□□ 0.2
CCDC40-202ENST00000374876 TAP1Q03518 808 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 GSTA5Q7RTV2 222 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 TMEM192Q8IY95 271 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 BBOF1Q8ND07 529 aa16.31■□□□□ 0.2
CCDC40-202ENST00000374876 FAM161BQ96MY7 647 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms