RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 DBTP11182 482 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 KRT20P35900 424 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 DALRD3Q5D0E6 543 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SCFD1Q8WVM8 642 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF75CPQ92670 426 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 DPF3Q92784 378 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 CD209Q9NNX6 404 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 STK17AQ9UEE5 414 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 CORINQ9Y5Q5 1042 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 IDH3BO43837 385 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 POLD2P49005 469 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 GJA9P57773 515 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 PDK4Q16654 411 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SPDYAQ5MJ70 313 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 TRMT10CQ7L0Y3 403 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 TMEM151BQ8IW70 566 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SHKBP1Q8TBC3 707 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 KBTBD7Q8WVZ9 684 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 BAP1Q92560 729 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 MAML1Q92585 1016 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 ISOC1Q96CN7 298 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 C12orf10Q9HB07 376 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 CFL2Q9Y281 166 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF254O75437 659 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SEMA3DO95025 777 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 KLHL2O95198 593 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 GYS1P13807 737 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 BCAMP50895 628 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 POU5F1Q01860 360 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 CENPCQ03188 943 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 DHX34Q14147 1143 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 DSC3Q14574 896 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 GALNT18Q6P9A2 607 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 RNF111Q6ZNA4 994 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF512Q96ME7 567 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 WRNIP1Q96S55 665 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 RNF26Q9BY78 433 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 TRIT1Q9H3H1 467 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 EPS15L1Q9UBC2 864 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 VANGL2Q9ULK5 521 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SLC8A2Q9UPR5 921 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 SIK3Q9Y2K2 1263 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 ZW10O43264 779 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TLR2O60603 784 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CDH16O75309 829 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ALX3O95076 343 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 FKBP9O95302 570 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 POLR2CP19387 275 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 MCAMP43121 646 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CHRNEQ04844 493 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TRAF2Q12933 501 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SNAPC2Q13487 334 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 DNASE1L3Q13609 305 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CCBE1Q6UXH8 406 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 USP37Q86T82 979 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SETD3Q86TU7 594 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 NUDCD3Q8IVD9 361 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TBC1D15Q8TC07 691 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SGF29Q96ES7 293 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 FARSBQ9NSD9 589 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ARMC1Q9NVT9 282 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ARHGAP26Q9UNA1 814 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TNKSO95271 1327 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SMCO2A6NFE2 343 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 USP12O75317 370 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 MFN2O95140 757 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 MX2P20592 715 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 RPA3P35244 121 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 MRPS15P82914 257 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ASIC2Q16515 512 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LETM2Q2VYF4 491 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CATSPER3Q86XQ3 398 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 GATAD2AQ86YP4 633 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 FAM9CQ8IZT9 166 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CDK5RAP1Q96SZ6 601 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CYP4F11Q9HBI6 524 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 POLMQ9NP87 494 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF277Q9NRM2 450 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF229Q9UJW7 825 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CDC14AQ9UNH5 594 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 HDAC3O15379 428 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 ZNF23P17027 643 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SLC9A3P48764 834 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 APOFQ13790 326 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 DNAL1Q4LDG9 190 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SNAP47Q5SQN1 464 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LDLRAP1Q5SW96 308 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 CYP4A22Q5TCH4 519 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 SCARA3Q6AZY7 606 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms