RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NKRFO15226 690 aaKnown RBP eCLIP14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 LCP1P13796 627 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 ZNF618Q5T7W0 954 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 WDR36Q8NI36 951 aaKnown RBP14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 RNFT2Q96EX2 444 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 PRMT7Q9NVM4 692 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 ING4Q9UNL4 249 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 NPTXRO95502 500 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 SDC4P31431 198 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 ZSWIM7Q19AV6 140 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 DDX18Q9NVP1 670 aaKnown RBP14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 IMPAD1Q9NX62 359 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 LCMT1Q9UIC8 334 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 ZDHHC9Q9Y397 364 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 INHBEP58166 350 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 KCNH2Q12809 1159 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 DACT2Q5SW24 774 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 LMBRD2Q68DH5 695 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 DDX53Q86TM3 631 aaKnown RBP14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 SH3KBP1Q96B97 665 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 LRRC4BQ9NT99 713 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 BTBD3Q9Y2F9 522 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 SH3GLB1Q9Y371 365 aa14.56□□□□□ -0.08
RAPGEF1-202ENST00000372190 SPDYE5A6NIY4 337 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 NQO1P15559 274 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 CHN1P15882 459 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 ACTR2P61160 394 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 USP39Q53GS9 565 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 DCP1BQ8IZD4 617 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 HMX1Q9NP08 348 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 SNX9Q9Y5X1 595 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 FAM187AA6NFU0 413 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 SYNCRIPO60506 623 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 ATP9AO75110 1047 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 SPANXN2Q5MJ10 180 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 PGBD3Q8N328 593 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 KLHL4Q9C0H6 718 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 NPHS2Q9NP85 383 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 EVPLLA8MZ36 301 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 TEX28O15482 410 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 FGFR2P21802 821 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 PEX5P50542 639 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 VBP1P61758 197 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 SUGP1Q8IWZ8 645 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 RDM1Q8NG50 284 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 C1orf50Q9BV19 199 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 PACSIN1Q9BY11 444 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 KCNF1Q9H3M0 494 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 PFDN2Q9UHV9 154 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 SALL1Q9NSC2 1324 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 C5orf58C9J3I9 102 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 ATP1A1P05023 1023 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 MAGEA2P43356 314 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 SV2CQ496J9 727 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 MZT2BQ6NZ67 158 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 RASSF6Q6ZTQ3 369 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 BHMTQ93088 406 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 XPO6Q96QU8 1125 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 COLEC11Q9BWP8 271 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 KCNQ5Q9NR82 932 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 KCND2Q9NZV8 630 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 MLXQ9UH92 298 aa14.55□□□□□ -0.08
RAPGEF1-202ENST00000372190 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 DSG3P32926 999 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 MCCD1P59942 119 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 GPC5P78333 572 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 C3orf20Q8ND61 904 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 RBM41Q96IZ5 413 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 RNF208Q9H0X6 261 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 AVENQ9NQS1 362 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 TMEM39AQ9NV64 488 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 HOXA2O43364 376 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 PQBP1O60828 265 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 LRG1P02750 347 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 CASP4P49662 377 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 ACOT2P49753 483 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 ROR2Q01974 943 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 STAT4Q14765 748 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 MGAT5BQ3V5L5 792 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 PAN2Q504Q3 1202 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 ZNF484Q5JVG2 852 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 SLC25A24Q6NUK1 477 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 SHCBP1Q8NEM2 672 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 TMEM169Q96HH4 297 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 MMTAG2Q9BU76 263 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 SP110Q9HB58 689 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 VAV3Q9UKW4 847 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 UBR1Q8IWV7 1749 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 SLC26A4O43511 780 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 CNOT3O75175 753 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 IL18RAPO95256 599 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 ANO4Q32M45 955 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 ARHGAP15Q53QZ3 475 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 C6orf62Q9GZU0 229 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 DCLRE1BQ9H816 532 aa14.54□□□□□ -0.08
RAPGEF1-202ENST00000372190 CNOT8Q9UFF9 292 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms