RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NCAPGQ9BPX3 1015 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 LRRC1Q9BTT6 524 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 MARCH5Q9NX47 278 aa27.6■■■□□ 2.01
ATPAF1-202ENST00000371937 FBXO21O94952 628 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 MCM3P25205 808 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 SDC4P31431 198 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 PCK1P35558 622 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 GJC1P36383 396 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 TAF5Q15542 800 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 ODF2Q5BJF6 829 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 FAM171A1Q5VUB5 890 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 LRRTM3Q86VH5 581 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 DCP1BQ8IZD4 617 aaKnown RBP27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 MAIP1Q8WWC4 291 aa27.59■■■□□ 2.01
ATPAF1-202ENST00000371937 TCF4P15884 667 aa27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 VARS2Q5ST30 1063 aaKnown RBP27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 ZFYVE27Q5T4F4 411 aa27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 CCDC50Q8IVM0 306 aa27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 CLEC4CQ8WTT0 213 aa27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 TMEM209Q96SK2 561 aa27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 RAB21Q9UL25 225 aa27.58■■■□□ 2.01
ATPAF1-202ENST00000371937 H2AFXP16104 143 aaPredicted RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 BDNFP23560 247 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 ALDH7A1P49419 539 aaKnown RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 BCAR1P56945 870 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 MRPS5P82675 430 aaKnown RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 SLC25A11Q02978 314 aaKnown RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 SMC1AQ14683 1233 aaKnown RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 TRNP1Q6NT89 227 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 FUT10Q6P4F1 479 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 SPATA2LQ8IUW3 424 aaPredicted RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 KLHL7Q8IXQ5 586 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 ARFGAP1Q8N6T3 406 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 RUBCNQ92622 972 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 KCNK16Q96T55 309 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 GPR62Q9BZJ7 368 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 ZCWPW1Q9H0M4 648 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 DMAP1Q9NPF5 467 aaPredicted RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 TMLHEQ9NVH6 421 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 HCSTQ9UBK5 93 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 FSCN2O14926 492 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 HSF2BPO75031 334 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 FGFR3P22607 806 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 TKTL1P51854 596 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 COPS2P61201 443 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 CCDC14Q49A88 953 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 RAB41Q5JT25 222 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 WDR93Q6P2C0 686 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 ADAT2Q7Z6V5 191 aaKnown RBP27.57■■■□□ 2
ATPAF1-202ENST00000371937 CEP57Q86XR8 500 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 ZMIZ2Q8NF64 920 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 PNKPQ96T60 521 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 SLITRK6Q9H5Y7 841 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 PNPLA8Q9NP80 782 aa27.57■■■□□ 2
ATPAF1-202ENST00000371937 SART1O43290 800 aaKnown RBP27.56■■■□□ 2
ATPAF1-202ENST00000371937 GLI1P08151 1106 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 PTPN9P43378 593 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 CDR1P51861 262 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 ADCY1Q08828 1119 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 MRPL58Q14197 206 aaKnown RBP27.56■■■□□ 2
ATPAF1-202ENST00000371937 NFE2Q16621 373 aaPredicted RBP27.56■■■□□ 2
ATPAF1-202ENST00000371937 ZNF280DQ6N043 979 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 CFAP57Q96MR6 1250 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 MCOLN1Q9GZU1 580 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 CNGB3Q9NQW8 809 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 LTBP2Q14767 1821 aa27.56■■■□□ 2
ATPAF1-202ENST00000371937 OR6C75A6NL08 312 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 KRT1P04264 644 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 MIPP30301 263 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 CACNA2D1P54289 1103 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 CTXN3Q4LDR2 81 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 FBXO38Q6PIJ6 1188 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 DDX47Q9H0S4 455 aaKnown RBP27.55■■■□□ 2
ATPAF1-202ENST00000371937 USP18Q9UMW8 372 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 BAIAP3O94812 1187 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 BRD3Q15059 726 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 ATP13A4Q4VNC1 1196 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 SLC39A12Q504Y0 691 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 UBE2Q1Q7Z7E8 422 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 CCDC26Q8TAB7 109 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 OXCT2Q9BYC2 517 aaPredicted RBP27.55■■■□□ 2
ATPAF1-202ENST00000371937 PRDM10Q9NQV6 1147 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 TMEM30AQ9NV96 361 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.55■■■□□ 2
ATPAF1-202ENST00000371937 STIM2Q9P246 746 aa27.55■■■□□ 2
ATPAF1-202ENST00000371937 NT5C1B-RDH14C9J2C7 533 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 HHLA1C9JL84 531 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 YWHAZP63104 245 aaKnown RBP27.54■■■□□ 2
ATPAF1-202ENST00000371937 C15orf59Q2T9L4 293 aaPredicted RBP27.54■■■□□ 2
ATPAF1-202ENST00000371937 MAATS1Q7Z4T9 603 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 FAM149B1Q96BN6 582 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 DDX23Q9BUQ8 820 aaKnown RBP27.54■■■□□ 2
ATPAF1-202ENST00000371937 RHOBTB2Q9BYZ6 727 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 OSBPL8Q9BZF1 889 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 ZWILCHQ9H900 591 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 NR2E1Q9Y466 385 aa27.54■■■□□ 2
ATPAF1-202ENST00000371937 CCDC151A5D8V7 595 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 PRPSAP2O60256 369 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 TRUB2O95900 331 aaKnown RBP27.53■■■□□ 2
ATPAF1-202ENST00000371937 NDUFV1P49821 464 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms