RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 GHRHRQ02643 423 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 BFSP2Q13515 415 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 PTK6Q13882 451 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TSNAXIP1Q2TAA8 658 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 KCNT1Q5JUK3 1230 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SPRYD7Q5W111 196 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 AP1ARQ63HQ0 302 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SMYD5Q6GMV2 418 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 C3orf62Q6ZUJ4 267 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SLFN11Q7Z7L1 901 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 KIAA0319LQ8IZA0 1049 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TFB1MQ8WVM0 346 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SCG3Q8WXD2 468 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TTC17Q96AE7 1141 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CCDC97Q96F63 343 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM118BQ9BPY3 351 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 NAT9Q9BTE0 207 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 COLEC11Q9BWP8 271 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 LHX5Q9H2C1 402 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 LRRC19Q9H756 370 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SPATS2LQ9NUQ6 558 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ZFATQ9P243 1243 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF831Q5JPB2 1677 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 MTA2O94776 668 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM107AO95990 144 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ARF4P18085 180 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ADSSP30520 456 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 PPARGP37231 505 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF135P52742 658 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC6A3Q01959 620 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 NFE2Q16621 373 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 AMHR2Q16671 573 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 EMC1Q8N766 993 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 LRRC57Q8N9N7 239 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 HSFY1Q96LI6 401 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SP110Q9HB58 689 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ACP6Q9NPH0 428 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 XPNPEP3Q9NQH7 507 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 COL5A3P25940 1745 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 WDR91A4D1P6 747 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 FSCN2O14926 492 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 NCAM2O15394 837 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 LGR5O75473 907 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 GMNNO75496 209 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 MOCS2O96007 188 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 MMP3P08254 477 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 MMP8P22894 467 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 OR1G1P47890 313 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 GEMIN4P57678 1058 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 IRX4P78413 519 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 LAMB3Q13751 1172 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 UGP2Q16851 508 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 CCDC38Q502W7 563 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 MFSD7Q6UXD7 560 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ATPAF2Q8N5M1 289 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 SYT15Q9BQS2 421 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 CDC42EP4Q9H3Q1 356 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 SMYD3Q9H7B4 428 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 CD248Q9HCU0 757 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 DDIT4Q9NX09 232 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 TJP2Q9UDY2 1190 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 AP4E1Q9UPM8 1137 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 DRG1Q9Y295 367 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 MYO5AQ9Y4I1 1855 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 TNRC6CQ9HCJ0 1690 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 LAMB1P07942 1786 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ZSCAN5CA6NGD5 496 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 DNALI1O14645 258 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 B4GALT5O43286 388 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 MSCO60682 206 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ACO1P21399 889 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 AKAP5P24588 427 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 NFKBIAP25963 317 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 RPL21P46778 160 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 NR2C2P49116 596 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ELAVL2Q12926 359 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 PTGISQ16647 500 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ERMARDQ5T6L9 678 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 DENND1BQ6P3S1 775 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 SH3TC2Q8TF17 1288 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ACSF2Q96CM8 615 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 IFT43Q96FT9 208 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 PCDHB18PQ96TA0 734 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 WDCPQ9H6R7 721 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 KRT82Q9NSB4 513 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 NSMCE4AQ9NXX6 385 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 DDX43Q9NXZ2 648 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC24A2Q9UI40 661 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 CHMP2BQ9UQN3 213 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 PCDHB7Q9Y5E2 793 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 TMEM120BA0PK00 339 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 APOC4-APOC2K7ER74 178 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 GPC4O75487 556 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ZWINTO95229 277 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ATG7O95352 703 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 APOC2P02655 101 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 ERBB2P04626 1255 aa5.53□□□□□ -1.52
SMNDC1-202ENST00000369603 GSTA1P08263 222 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms