RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 OSMRQ99650 979 aa18.57■□□□□ 0.56
SNX27-203ENST00000368843 GTF2A1LQ9UNN4 478 aa18.57■□□□□ 0.56
SNX27-203ENST00000368843 FXR1P51114 621 aaKnown RBP eCLIP18.57■□□□□ 0.56
SNX27-203ENST00000368843 DNAL1Q4LDG9 190 aa18.57■□□□□ 0.56
SNX27-203ENST00000368843 KIF2BQ8N4N8 673 aa18.57■□□□□ 0.56
SNX27-203ENST00000368843 RIN3Q8TB24 985 aa18.57■□□□□ 0.56
SNX27-203ENST00000368843 THAP2Q9H0W7 228 aa18.57■□□□□ 0.56
SNX27-203ENST00000368843 PHF20L1A8MW92 1017 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 KLHL2O95198 593 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 C2CD6Q53TS8 623 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 EFL1Q7Z2Z2 1120 aaKnown RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 NFKBIL1Q9UBC1 381 aaPredicted RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 SERPINI2O75830 405 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 NBPF12Q5TAG4 269 aaPredicted RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 CACHD1Q5VU97 1274 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 CBX4O00257 560 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 RASSF9O75901 435 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 MLH1P40692 756 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 MDH1P40925 334 aaKnown RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 RHOAP61586 193 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 PDIA6Q15084 440 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 ITIH5Q86UX2 942 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 CD302Q8IX05 232 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 CMTM5Q96DZ9 223 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 POP1Q99575 1024 aaKnown RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 MANSC1Q9H8J5 431 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 KRCC1Q9NPI7 259 aaPredicted RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 TADA1Q96BN2 335 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 MAP3K14Q99558 947 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 CCDC3Q9BQI4 270 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 MKNK1Q9BUB5 465 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 FBXL21Q9UKT6 434 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 XPO1O14980 1071 aaKnown RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 GRK3P35626 688 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 GEMIN4P57678 1058 aaKnown RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 KCNT1Q5JUK3 1230 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 CCDC81Q6ZN84 652 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 USP49Q70CQ1 688 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 ARMC2Q8NEN0 867 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 CYFIP2Q96F07 1278 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 OLFM3Q96PB7 478 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 GPATCH2LQ9NWQ4 482 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 RPS6KB2Q9UBS0 482 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 FBXW10Q5XX13 1052 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 RD3Q7Z3Z2 195 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 IL17RAQ96F46 866 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 IARS2Q9NSE4 1012 aaKnown RBP18.56■□□□□ 0.56
SNX27-203ENST00000368843 SETD4Q9NVD3 440 aa18.56■□□□□ 0.56
SNX27-203ENST00000368843 VDRP11473 427 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 HPGDP15428 266 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 COILP38432 576 aaPredicted RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 RASGRP2Q7LDG7 609 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 MYO1HQ8N1T3 1032 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 RBBP8Q99708 897 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 UBXN6Q9BZV1 441 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 CDY2AQ9Y6F7 541 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 CDY1Q9Y6F8 540 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 APOA4P06727 396 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 ZNF280DQ6N043 979 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 HNRNPRO43390 633 aaKnown RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 MED24O75448 989 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 LHX1P48742 406 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 BCAT1P54687 386 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 AASDHQ4L235 1098 aaPredicted RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 FAM172AQ8WUF8 416 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 THUMPD3Q9BV44 507 aaKnown RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 SNTG2Q9NY99 539 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 CSDE1O75534 798 aaKnown RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 UBTFL6P0CB48 400 aaPredicted RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 RAG1P15918 1043 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 LRIG3Q6UXM1 1119 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 MAGED4Q96JG8 741 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 TLR8Q9NR97 1041 aaKnown RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 LINC00854A0A1B0GVQ3 168 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 A0A1W2PQJ5 194 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 C16orf96A6NNT2 1141 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 TEX9Q8N6V9 391 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 VPS33BQ9H267 617 aa18.55■□□□□ 0.56
SNX27-203ENST00000368843 EXOSC4Q9NPD3 245 aaKnown RBP18.55■□□□□ 0.56
SNX27-203ENST00000368843 KYNUQ16719 465 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 DNAJB3Q8WWF6 145 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 E2F7Q96AV8 911 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 TSPAN3O60637 253 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 HNRNPCP07910 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNX27-203ENST00000368843 S100A5P33763 92 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 CNBD2Q96M20 576 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 CLPBQ9H078 707 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 NT5MQ9NPB1 228 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 PDGFCQ9NRA1 345 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 PSTPIP1O43586 416 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 TGFB2P61812 414 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
SNX27-203ENST00000368843 NT5DC4Q86YG4 428 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 EPN3Q9H201 632 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 A0A087WZ62 844 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 STRNO43815 780 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 SKAP2O75563 359 aaPredicted RBP18.54■□□□□ 0.56
SNX27-203ENST00000368843 SUPT7LO94864 414 aa18.54■□□□□ 0.56
SNX27-203ENST00000368843 TERF2Q15554 542 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms