RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NACC2Q96BF6 587 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 AP3B1O00203 1094 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 RHOBTB3O94955 611 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 STILQ15468 1287 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 VPS28Q9UK41 221 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 KDM6AO15550 1401 aaPredicted RBP18.79■□□□□ 0.6
SNX27-202ENST00000368841 EZH2Q15910 746 aaKnown RBP18.79■□□□□ 0.6
SNX27-202ENST00000368841 ACAD10Q6JQN1 1059 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 TIPINQ9BVW5 301 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 DUSP10Q9Y6W6 482 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 MAGEB2O15479 319 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 HBP1O60381 514 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 SOAT2O75908 522 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 KLHL2O95198 593 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 NFIL3Q16649 462 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 C16orf59Q7L2K0 433 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 TMEM121Q9BTD3 319 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 NSMCE4AQ9NXX6 385 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 SLC12A8A0AV02 714 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 ERI2A8K979 691 aaKnown RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 MSH4O15457 936 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 TPH1P17752 444 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 CTXN3Q4LDR2 81 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 NSL1Q96IY1 281 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 ACOX2Q99424 681 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 GPRC5DQ9NZD1 345 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 CRB1P82279 1406 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 ARHGEF5Q12774 1597 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 E9PBE3 544 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 KLHL41O60662 606 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 HPGDP15428 266 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 AKAP5P24588 427 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 DSG3P32926 999 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 CLK2P49760 499 aaKnown RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 SLC47A2Q86VL8 602 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 GPRASP2Q96D09 838 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 DEPDC7Q96QD5 511 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 KCNK16Q96T55 309 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 ATP6V1HQ9UI12 483 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 MTO1Q9Y2Z2 717 aaKnown RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 FAM83EQ2M2I3 478 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 CBWD2Q8IUF1 395 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 FAM172AQ8WUF8 416 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 INTS13Q9NVM9 706 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 SP100P23497 879 aaPredicted RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 LSP1P33241 339 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 HALP42357 657 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 LY6KQ17RY6 165 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 TMED8Q6PL24 325 aaPredicted RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 CCNI2Q6ZMN8 369 aaPredicted RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 C3orf67Q6ZVT6 689 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 EMC1Q8N766 993 aa18.78■□□□□ 0.6
SNX27-202ENST00000368841 RSPH9Q9H1X1 276 aaPredicted RBP18.78■□□□□ 0.6
SNX27-202ENST00000368841 MOXD2PA6NHM9 499 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 CDH16O75309 829 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 FYNP06241 537 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 CSHL1Q14406 222 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 NAPEPLDQ6IQ20 393 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 TRPC4Q9UBN4 977 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 PCDHB2Q9Y5E7 798 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 ZCCHC11Q5TAX3 1644 aaKnown RBP18.77■□□□□ 0.6
SNX27-202ENST00000368841 VPS26AO75436 327 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 SCARA3Q6AZY7 606 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 NOA1Q8NC60 698 aaKnown RBP18.77■□□□□ 0.6
SNX27-202ENST00000368841 SPACA7Q96KW9 195 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 CPSF1Q10570 1443 aaKnown RBP18.77■□□□□ 0.6
SNX27-202ENST00000368841 MED24O75448 989 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 ANTXR2P58335 489 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 TOMM20Q15388 145 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 CACHD1Q5VU97 1274 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 UNC45BQ8IWX7 931 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 FLCNQ8NFG4 579 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 KRT35Q92764 455 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 ZNF512BQ96KM6 892 aaPredicted RBP18.77■□□□□ 0.6
SNX27-202ENST00000368841 ARP10275 920 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 SLC30A10Q6XR72 485 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 ZNF333Q96JL9 665 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 CCDC134Q9H6E4 229 aa18.77■□□□□ 0.6
SNX27-202ENST00000368841 SCAMP3O14828 347 aaKnown RBP18.77■□□□□ 0.59
SNX27-202ENST00000368841 RCN1Q15293 331 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 PHTF1Q9UMS5 762 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 CCNT2O60583 730 aaKnown RBP18.77■□□□□ 0.59
SNX27-202ENST00000368841 TOMM70O94826 608 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 FAM131BQ86XD5 332 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 DNAJC9Q8WXX5 260 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 TMEM169Q96HH4 297 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 TPD52L3Q96J77 140 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 PRMT7Q9NVM4 692 aaPredicted RBP18.77■□□□□ 0.59
SNX27-202ENST00000368841 DLGAP2Q9P1A6 1054 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 GLI2P10070 1586 aa18.77■□□□□ 0.59
SNX27-202ENST00000368841 TNNI3P19429 210 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 OXCT1P55809 520 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 CAPN15O75808 1086 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 FLT3P36888 993 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 POM121L1PQ3SYA9 428 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 DDI2Q5TDH0 399 aa18.76■□□□□ 0.59
SNX27-202ENST00000368841 COLEC11Q9BWP8 271 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms