RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 PRKCZQ05513 592 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 XRCC4Q13426 336 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 DEFB115Q30KQ5 88 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 FAM182AQ5T1J6 154 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SCARA3Q6AZY7 606 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 FAM117BQ6P1L5 589 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 DENND1BQ6P3S1 775 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 APLFQ8IW19 511 aaPredicted RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 SCN4BQ8IWT1 228 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SIX6OS1Q8N1H7 587 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 NME8Q8N427 588 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 APPL2Q8NEU8 664 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 LMO3Q8TAP4 145 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 GLT1D1Q96MS3 346 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 GAD1Q99259 594 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 IP6K2Q9UHH9 426 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 PRG3Q9Y2Y8 225 aaPredicted RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 SIPA1L1O43166 1804 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 ASS1P00966 412 aaKnown RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 ALOX15P16050 662 aaPredicted RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 CHRNB2P17787 502 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 HOXD10P28358 340 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 MSH2P43246 934 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 NUMBP49757 651 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 PPP2R2AP63151 447 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 NME3Q13232 169 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 PPP2R5DQ14738 602 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 RASAL3Q86YV0 1011 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 C1orf127Q8N9H9 656 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 CASKIN2Q8WXE0 1202 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 ZNF570Q96NI8 536 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 APBA2Q99767 749 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 PDZD7Q9H5P4 517 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 VPS37BQ9H9H4 285 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 TBK1Q9UHD2 729 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 CPSF3Q9UKF6 684 aaKnown RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 F8VP50 259 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 AGPSO00116 658 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 LCA5LO95447 670 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 GRB14Q14449 540 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 SMAD1Q15797 465 aaKnown RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 GET4Q7L5D6 327 aaPredicted RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 FAM228AQ86W67 206 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 MMGT1Q8N4V1 131 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 SOCS4Q8WXH5 440 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 TMEM176AQ96HP8 235 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 STRA6Q9BX79 667 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 UBE2OQ9C0C9 1292 aaKnown RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 MROH7Q68CQ1 1323 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 A6NJR5 290 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 TXNDC9O14530 226 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 LIN7AO14910 233 aaPredicted RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 MGRN1O60291 552 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 IQCF3P0C7M6 154 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 CDH6P55285 790 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 SNX16P57768 344 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 BASP1P80723 227 aaKnown RBP9.59□□□□□ -0.87
CALD1-202ENST00000361901 SP3Q02447 781 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 MCL1Q07820 350 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 C1orf228Q6PIY5 440 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 WDR60Q8WVS4 1066 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 OSBPL8Q9BZF1 889 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 ETNK1Q9HBU6 452 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 GPATCH2LQ9NWQ4 482 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 TUBGCP4Q9UGJ1 667 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 ANAPC5Q9UJX4 755 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 STRIP2Q9ULQ0 834 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 GABRQQ9UN88 632 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 CDY2AQ9Y6F7 541 aa9.59□□□□□ -0.87
CALD1-202ENST00000361901 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TSPAN1O60635 241 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 PRLRP16471 622 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SDC4P31431 198 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 USP46P62068 366 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SLC10A6Q3KNW5 377 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 PPP1R21Q6ZMI0 780 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TRPM8Q7Z2W7 1104 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 ZNF677Q86XU0 584 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 LPIN3Q9BQK8 851 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 C16orf70Q9BSU1 422 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 PDLIM7Q9NR12 457 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 KLHL14Q9P2G3 628 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TSPAN16Q9UKR8 245 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SLC4A7Q9Y6M7 1214 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 FAM153BP0C7A2 387 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TMED10P49755 219 aaKnown RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 BCAR1P56945 870 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 KRT17Q04695 432 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TRIM32Q13049 653 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 ZBTB17Q13105 803 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TAF12Q16514 161 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 FAM153CQ494X1 144 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SLC13A5Q86YT5 568 aaPredicted RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 CCNYQ8ND76 341 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 FBXL18Q96ME1 805 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms