RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 UBE2OQ9C0C9 1292 aaKnown RBP11.35□□□□□ -0.59
CLIP1-203ENST00000361654 EPC1Q9H2F5 836 aa11.35□□□□□ -0.59
CLIP1-203ENST00000361654 PNMA8BQ9ULN7 279 aaPredicted RBP11.35□□□□□ -0.59
CLIP1-203ENST00000361654 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 NCK2O43639 380 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 IFNA14P01570 189 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 PEX6Q13608 980 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 FSCN1Q16658 493 aaKnown RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 TSGA10IPQ3SY00 556 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CLEC4FQ8N1N0 589 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 NOP53Q9NZM5 478 aaKnown RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 RNF112Q9ULX5 631 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 NRKQ7Z2Y5 1582 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 RPSAP08865 295 aaKnown RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 GHRP10912 638 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 YWHAQP27348 245 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 DSG3P32926 999 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CHI3L1P36222 383 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 SLC16A1P53985 500 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 C16orf89Q6UX73 402 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 ATP8B4Q8TF62 1192 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 SETD4Q9NVD3 440 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CYP39A1Q9NYL5 469 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 MGAT4DA6NG13 374 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 TRPC5OSA6NMA1 111 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CDH16O75309 829 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 OAZ1P54368 228 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 ZCCHC8Q6NZY4 707 aaKnown RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 OSBPL6Q9BZF3 934 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CASTOR2A6NHX0 329 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 IGSF6O95976 241 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 PSEN2P49810 448 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 POLR2LP62875 67 aaKnown RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 PCNX4Q63HM2 1172 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CYP4Z1Q86W10 505 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 CCDC60Q8IWA6 550 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 DPF2Q92785 391 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 DNAJC1Q96KC8 554 aaKnown RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 FAM167BQ9BTA0 163 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 ZNF518BQ9C0D4 1074 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 KLHL28Q9NXS3 571 aa11.34□□□□□ -0.59
CLIP1-203ENST00000361654 FBXO2Q9UK22 296 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-203ENST00000361654 A0A1B0GW55 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 SRGNP10124 158 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 C16orf87Q6PH81 154 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 FIBCD1Q8N539 461 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 SYT15Q9BQS2 421 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 PRR23D1E9PI22 279 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ENDOD1O94919 500 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 PRR23D2P0DMB1 279 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 FGFR1P11362 822 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 CCR1P32246 355 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 HSPA9P38646 679 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TRMT11Q7Z4G4 463 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ZNF655Q8N720 491 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 GMCL1P1Q8NEA9 526 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 HASPINQ8TF76 798 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 SPACA7Q96KW9 195 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 KCNK16Q96T55 309 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM245Q9H330 911 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TBC1D3BA6NDS4 549 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 MSH4O15457 936 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 WDR47O94967 919 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 MDH1BQ5I0G3 518 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 GRAMD4Q6IC98 578 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ADNPQ9H2P0 1102 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 PCMTD2Q9NV79 361 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TMCC3Q9ULS5 477 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 KLHL2O95198 593 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 POMCP01189 267 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM253P0C7T8 217 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 TGM2P21980 687 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms