RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LRRTM3Q86VH5 581 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 HNRNPLLQ8WVV9 542 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TMEM209Q96SK2 561 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CNPY3Q9BT09 278 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ZCWPW1Q9H0M4 648 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 LRRC4Q9HBW1 653 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TMLHEQ9NVH6 421 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 COL4A6Q14031 1691 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CCDC151A5D8V7 595 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CCDC188H7C350 402 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PDGFRAP16234 1089 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 EFHC1Q5JVL4 640 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FAM171A1Q5VUB5 890 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 WDR93Q6P2C0 686 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 POLNQ7Z5Q5 900 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 DCP1BQ8IZD4 617 aaKnown RBP22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ZMIZ2Q8NF64 920 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RXFP2Q8WXD0 754 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RUBCNQ92622 972 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ZNF689Q96CS4 500 aaPredicted RBP22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 GPR62Q9BZJ7 368 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CWH43Q9H720 699 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 IL23AQ9NPF7 189 aa22.02■■□□□ 1.12
MAP1LC3A-201ENST00000360668 VWA8A3KMH1 1905 aa22.02■■□□□ 1.11
MAP1LC3A-201ENST00000360668 KRIT1O00522 736 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 LRCH4O75427 683 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RNF8O76064 485 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 FBXO21O94952 628 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 FLT3P36888 993 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 WDR5P61964 334 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ADIGQ0VDE8 80 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 HADHQ16836 314 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 GLE1Q53GS7 698 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RAB41Q5JT25 222 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 TRNP1Q6NT89 227 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 EXD1Q8NHP7 514 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 NLRC5Q86WI3 1866 aa22.01■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PTPRDP23468 1912 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 OR6C75A6NL08 312 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 GRAP2O75791 330 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 DESP17661 470 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PCK1P35558 622 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ALDH7A1P49419 539 aaKnown RBP22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CLCN6P51797 869 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ADCY1Q08828 1119 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 TAF5Q15542 800 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ZNF280DQ6N043 979 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 AADACL2Q6P093 401 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 TMCO3Q6UWJ1 677 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 SIX6OS1Q8N1H7 587 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ARFGAP1Q8N6T3 406 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CLEC4CQ8WTT0 213 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 NCAPGQ9BPX3 1015 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PNPLA8Q9NP80 782 aa22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 DMAP1Q9NPF5 467 aaPredicted RBP22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 DDX56Q9NY93 547 aaKnown RBP22■■□□□ 1.11
MAP1LC3A-201ENST00000360668 HHLA1C9JL84 531 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RRP9O43818 475 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ZRANB2O95218 330 aaKnown RBP eCLIP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RHOXF2BP0C7M4 288 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 BDNFP23560 247 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 SDC4P31431 198 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CACNA2D1P54289 1103 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 DEFB103AP81534 67 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 MRPS5P82675 430 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 SLC25A11Q02978 314 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 SLC13A5Q86YT5 568 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 SPATA2LQ8IUW3 424 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 C7orf61Q8IZ16 206 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 KCNK16Q96T55 309 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RHOXF2Q9BQY4 288 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 OXCT2Q9BYC2 517 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RC3H2Q9HBD1 1191 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 TMEM30AQ9NV96 361 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CEP290O15078 2479 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 GOLGA6L10A0A0M3HER8 536 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 NT5C1B-RDH14C9J2C7 533 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 HSF2BPO75031 334 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 ERLIN1O75477 346 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 GLI1P08151 1106 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 KRT7P08729 469 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 TCF4P15884 667 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PTPN9P43378 593 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 TKTL1P51854 596 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PPIGQ13427 754 aaKnown RBP eCLIP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PPP2R5EQ16537 467 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 NFE2Q16621 373 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CCDC14Q49A88 953 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CTXN3Q4LDR2 81 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CEP57Q86XR8 500 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RCOR2Q8IZ40 523 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 FUBP3Q96I24 572 aaKnown RBP eCLIP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 RBM41Q96IZ5 413 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 AP1M1Q9BXS5 423 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 EPC1Q9H2F5 836 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CNGB3Q9NQW8 809 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 PRKAG2Q9UGJ0 569 aa21.99■■□□□ 1.11
MAP1LC3A-201ENST00000360668 CARNS1A5YM72 827 aa21.98■■□□□ 1.11
MAP1LC3A-201ENST00000360668 H7C4K7 107 aa21.98■■□□□ 1.11
MAP1LC3A-201ENST00000360668 SART1O43290 800 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms