RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PCSK7Q16549 785 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 PPHLN1Q8NEY8 458 aaKnown RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 OR5B17Q8NGF7 314 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 ATXN3P54252 364 aaPredicted RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 ZNF235Q14590 738 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 TAF1CQ15572 869 aaPredicted RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 DCAF4L1Q3SXM0 396 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 LLGL2Q6P1M3 1020 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 SPATA2LQ8IUW3 424 aaPredicted RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 VPS33BQ9H267 617 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 KIF9Q9HAQ2 790 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 ABCF3Q9NUQ8 709 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 DISP2A7MBM2 1401 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 SNX2O60749 519 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 UBA1P22314 1058 aaKnown RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 RPL7AP62424 266 aaKnown RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 TMCO4Q5TGY1 634 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 FUKQ8N0W3 1084 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 BCAS3Q9H6U6 928 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 BARX2Q9UMQ3 279 aaPredicted RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 L3MBTL1Q9Y468 752 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 IQCA1LA6NCM1 817 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 SDR42E2A6NKP2 422 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 NUDT17P0C025 328 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CPB1P15086 417 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 PNPLA4P41247 253 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CNGA2Q16280 664 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 ZCCHC9Q8N567 271 aaKnown RBP16.95■□□□□ 0.3
SCAF1-201ENST00000360565 RMDN1Q96DB5 314 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CMTM5Q96DZ9 223 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CCDC138Q96M89 665 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 APOL2Q9BQE5 337 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 AGPSO00116 658 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 FSBPO95073 299 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 TGM2P21980 687 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 FDFT1P37268 417 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 RCN1Q15293 331 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 TRIP10Q15642 601 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 DDIASQ8IXT1 998 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 LRRC57Q8N9N7 239 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 SGF29Q96ES7 293 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 TMA16Q96EY4 203 aaKnown RBP16.95■□□□□ 0.3
SCAF1-201ENST00000360565 DRC3Q9H069 523 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 ATICP31939 592 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 REPS2Q8NFH8 660 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CDC26Q8NHZ8 85 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 MROH8Q9H579 483 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 KBTBD13C9JR72 458 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 FSCN2O14926 492 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 SNX3O60493 162 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CHKAP35790 457 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 BCAT1P54687 386 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 KCNK16Q96T55 309 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CDY2AQ9Y6F7 541 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 CDY1Q9Y6F8 540 aa16.95■□□□□ 0.3
SCAF1-201ENST00000360565 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 LACTBL1A8MY62 500 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 AP3B1O00203 1094 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 ZNF189O75820 626 aaPredicted RBP16.94■□□□□ 0.3
SCAF1-201ENST00000360565 ZNF286BP0CG31 522 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 GFAPP14136 432 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 TGFB2P61812 414 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 RARS2Q5T160 578 aaKnown RBP16.94■□□□□ 0.3
SCAF1-201ENST00000360565 SCUBE3Q8IX30 993 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 RASGEF1CQ8N431 466 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 OSMRQ99650 979 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 ARHGEF38Q9NXL2 777 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 TSR3Q9UJK0 312 aaKnown RBP16.94■□□□□ 0.3
SCAF1-201ENST00000360565 SPEF2Q9C093 1822 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 PMPCBO75439 489 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 AP1G2O75843 785 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 ADRA1DP25100 572 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 ELMO2Q96JJ3 720 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 MRPL40Q9NQ50 206 aaKnown RBP16.94■□□□□ 0.3
SCAF1-201ENST00000360565 SLC38A7Q9NVC3 462 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 MTSS1O43312 755 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 PIAS1O75925 651 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 ATP6V1G2O95670 118 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 HMBSP08397 361 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 CYP2F1P24903 491 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 AQP5P55064 265 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 NCKAP1LP55160 1127 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 FRA10AC1Q70Z53 315 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 NEUROG2Q9H2A3 272 aa16.94■□□□□ 0.3
SCAF1-201ENST00000360565 MICAL2O94851 1124 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 NOMO3P69849 1222 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 MED21Q13503 144 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 GNASQ5JWF2 1037 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 NAPEPLDQ6IQ20 393 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 DENND1BQ6P3S1 775 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 SLFN11Q7Z7L1 901 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 ART4Q93070 314 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 CENPTQ96BT3 561 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 CEP41Q9BYV8 373 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 TM9SF1O15321 606 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 TBC1D12O60347 775 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms