RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 STX12Q86Y82 276 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 MAELQ96JY0 434 aaKnown RBP10.33□□□□□ -0.76
SIN3A-201ENST00000360439 FAM192AQ9GZU8 254 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 ETNK2Q9NVF9 386 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SNX24Q9Y343 169 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 AFG3L2Q9Y4W6 797 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 A0A087X0T9 212 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 GIPC1O14908 333 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 ZBTB24O43167 697 aaPredicted RBP10.33□□□□□ -0.76
SIN3A-201ENST00000360439 LINGO3P0C6S8 592 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 FAM228BP0C875 321 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 FSTL1Q12841 308 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 BFSP2Q13515 415 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 PON2Q15165 354 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SURF1Q15526 300 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 METTL7BQ6UX53 244 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 CATSPER3Q86XQ3 398 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 RMDN1Q96DB5 314 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 ACAP3Q96P50 834 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 APBA2Q99767 749 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 PTPN22Q9Y2R2 807 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 NR2E3Q9Y5X4 410 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 COMMD3-BMI1R4GMX3 469 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SYNJ2BP-COX16A0A087WUM0 186 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 NKRFO15226 690 aaKnown RBP eCLIP10.33□□□□□ -0.769e-7■□□□□ 11.1
SIN3A-201ENST00000360439 ESRRBO95718 433 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SREBF1P36956 1147 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 PRKCIP41743 596 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 EFNA5P52803 228 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 KPNB1Q14974 876 aaKnown RBP10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SULT1C3Q6IMI6 304 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 ZNF746Q6NUN9 644 aaPredicted RBP10.33□□□□□ -0.76
SIN3A-201ENST00000360439 CCDC137Q6PK04 289 aaKnown RBP10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SLC22A8Q8TCC7 542 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 NOL6Q9H6R4 1146 aaKnown RBP10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SYNDIG1Q9H7V2 258 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 PCDH12Q9NPG4 1184 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 PCMTD2Q9NV79 361 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 SETD4Q9NVD3 440 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 COX16Q9P0S2 106 aa10.33□□□□□ -0.76
SIN3A-201ENST00000360439 NPHP3-ACAD11A0A0J9YXS1 232 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CFAP69A5D8W1 941 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ASAP2O43150 1006 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ARHGEF9O43307 516 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 NPPAP01160 153 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 POLR2EP19388 210 aaKnown RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 FNTAP49354 379 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CRHR2Q13324 411 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 MED21Q13503 144 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CYP2W1Q8TAV3 490 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ANKRD49Q8WVL7 239 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 VPS39Q96JC1 886 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 EHD2Q9NZN4 543 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 MATN2O00339 956 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 TSPAN4O14817 238 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CA12O43570 354 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 EPN2O95208 641 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CHN1P15882 459 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 SP100P23497 879 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CLCN3P51790 818 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CXCL17Q6UXB2 119 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 PACS1Q6VY07 963 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 JAMLQ86YT9 394 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ZNF564Q8TBZ8 553 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 GIPC2Q8TF65 315 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 FAM149B1Q96BN6 582 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 EFHD2Q96C19 240 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 PABPC3Q9H361 631 aaKnown RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CYP39A1Q9NYL5 469 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 MAPK13O15264 365 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 MSCO60682 206 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CBFA2T3O75081 653 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 LRRN2O75325 713 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 TGFB3P10600 412 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ACADSP16219 412 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ASPHQ12797 758 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 NPY5RQ15761 445 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 HYIQ5T013 277 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 C11orf63Q6NUN7 778 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 GLYCTKQ8IVS8 523 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 XXYLT1Q8NBI6 393 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 DNAJC1Q96KC8 554 aaKnown RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 MTG1Q9BT17 334 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 SEZ6LQ9BYH1 1024 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 RNF38Q9H0F5 515 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 DNAJC17Q9NVM6 304 aaKnown RBP10.32□□□□□ -0.76
SIN3A-201ENST00000360439 TRIM33Q9UPN9 1127 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 SLC8A2Q9UPR5 921 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 I3L4J1 428 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 CCRL2O00421 344 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 ITIH2P19823 946 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 VHLP40337 213 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 VAMP7P51809 220 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 AP2B1P63010 937 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 IFNL1Q8IU54 200 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 GALNT4Q8N4A0 578 aa10.32□□□□□ -0.76
SIN3A-201ENST00000360439 BEST2Q8NFU1 509 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms