RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CFAP57Q96MR6 1250 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 BLOC1S6Q9UL45 172 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 LRRD1A4D1F6 860 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 AGPSO00116 658 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 RTN3O95197 1032 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-202ENST00000358966 MCM3P25205 808 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 SLC1A1P43005 524 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 RANBP1P43487 201 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 LHX8Q68G74 356 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 LCLAT1Q6UWP7 414 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 RINLQ6ZS11 566 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 RNF180Q86T96 592 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 MYLK4Q86YV6 388 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-202ENST00000358966 APPL2Q8NEU8 664 aa13.27□□□□□ -0.29
GGPS1-202ENST00000358966 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-202ENST00000358966 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-202ENST00000358966 BEST1O76090 585 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 ITGB1P05556 798 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 TUBBP07437 444 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 PTGIRP43119 386 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 ATXN1P54253 815 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 OR2W6PQ8NHA6 318 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 NAP1L3Q99457 506 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 RHOBTB2Q9BYZ6 727 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 MAGEB5Q9BZ81 275 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 OSBPL8Q9BZF1 889 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 RMI1Q9H9A7 625 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 LRRC4CQ9HCJ2 640 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 A0A1W2PQ45 241 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 A0A1W2PQY0 241 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 SIGLEC16A6NMB1 481 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 CYB561D2O14569 222 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 B4GALT3O60512 393 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 RASSF9O75901 435 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 CD4P01730 458 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 LCP1P13796 627 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 YY1P25490 414 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 COILP38432 576 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 RPL21P46778 160 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 PLTPP55058 493 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 LAMB3Q13751 1172 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 MAATS1Q7Z4T9 603 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 PCSK9Q8NBP7 692 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 PEBP4Q96S96 227 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 HOMER3Q9NSC5 361 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 UTP11Q9Y3A2 253 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 HUS1O60921 280 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 KRT14P02533 472 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 PKDCCQ504Y2 493 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 HSPH1Q92598 858 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 SNX25Q9H3E2 840 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 DNAJC17Q9NVM6 304 aaKnown RBP13.26□□□□□ -0.29
GGPS1-202ENST00000358966 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 TRIM17Q9Y577 477 aa13.26□□□□□ -0.29
GGPS1-202ENST00000358966 TTC3P53804 2025 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 FSCN2O14926 492 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 PSTPIP1O43586 416 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 THP07101 528 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 CKBP12277 381 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 BRCC3P46736 316 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 SLC25A11Q02978 314 aaKnown RBP13.25□□□□□ -0.29
GGPS1-202ENST00000358966 KLF1Q13351 362 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-202ENST00000358966 SNCBQ16143 134 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
GGPS1-202ENST00000358966 GLIS1Q8NBF1 620 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 FBXO25Q8TCJ0 367 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 LRRN4Q8WUT4 740 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 ZNF560Q96MR9 790 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 SLITRK1Q96PX8 696 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 TMEM165Q9HC07 324 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 STRIP2Q9ULQ0 834 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 GPR182O15218 404 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 MAP3K6O95382 1288 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 IMPDH2P12268 514 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 CST5P28325 142 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-202ENST00000358966 MIPP30301 263 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 MTFR1Q15390 333 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 SPATA21Q7Z572 469 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 B4GALNT2Q8NHY0 566 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 SLC35F5Q8WV83 523 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 PWWP2AQ96N64 755 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 ERP44Q9BS26 406 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 STARD7Q9NQZ5 370 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
GGPS1-202ENST00000358966 GOLGA6BA6NDN3 693 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 PODXLO00592 558 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 TNFRSF8P28908 595 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms