RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 MMRN1Q13201 1228 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 PPP1R26Q5T8A7 1209 aaPredicted RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 IQSEC1Q6DN90 963 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 FAM183BPQ6ZVS7 135 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 TLK2Q86UE8 772 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 NIPA2Q8N8Q9 360 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 PRCCQ92733 491 aaPredicted RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 PGM2Q96G03 612 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 FAM167BQ9BTA0 163 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 NT5C1AQ9BXI3 368 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 GCOM2Q9BZD3 368 aaPredicted RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 ADAM7Q9H2U9 754 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 CYP3A43Q9HB55 503 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 GOLGA2P5Q9HBQ8 144 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 MLXIPLQ9NP71 852 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 TRIP11Q15643 1979 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 GPR32O75388 356 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 TTC4O95801 387 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 IFNAR2P48551 515 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 KCNJ2P63252 427 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 CNGA2Q16280 664 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 C6orf118Q5T5N4 469 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 ERMARDQ5T6L9 678 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF410Q86VK4 478 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 KCTD6Q8NC69 237 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 PEBP4Q96S96 227 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 DPEP3Q9H4B8 488 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 SCN1AP35498 2009 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 BRCA2P51587 3418 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 IGF2BP3O00425 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 TREHO43280 583 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 RECQL4O94761 1208 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 MYL3P08590 195 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 VCPP55072 806 aaKnown RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 GAD2Q05329 585 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 RFX6Q8HWS3 928 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 ALLCQ8N6M5 410 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 C7orf31Q8N865 590 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 MRRFQ96E11 262 aaKnown RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 RBM15Q96T37 977 aaKnown RBP eCLIP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 GPATCH2LQ9NWQ4 482 aa16.76■□□□□ 0.27
PTPN5-201ENST00000358540 DDX56Q9NY93 547 aaKnown RBP16.76■□□□□ 0.27
PTPN5-201ENST00000358540 PFKMP08237 780 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 VIMP08670 466 aaKnown RBP16.75■□□□□ 0.27
PTPN5-201ENST00000358540 PDGFRBP09619 1106 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 KDELR1P24390 212 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 HUNKP57058 714 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 LRRC14Q15048 493 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 HADHQ16836 314 aaKnown RBP16.75■□□□□ 0.27
PTPN5-201ENST00000358540 OR6B3Q8NGW1 331 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 ADAM33Q9BZ11 813 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 VRTNQ9H8Y1 702 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 MAP3K6O95382 1288 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 PECAM1P16284 738 aaPredicted RBP16.75■□□□□ 0.27
PTPN5-201ENST00000358540 YARSP54577 528 aaKnown RBP16.75■□□□□ 0.27
PTPN5-201ENST00000358540 SYCP2LQ5T4T6 812 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 PMF1Q6P1K2 205 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 NPNTQ6UXI9 565 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 LRRC34Q8IZ02 419 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 RXFP2Q8WXD0 754 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 CFAP57Q96MR6 1250 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 FAM129AQ9BZQ8 928 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 MIS12Q9H081 205 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 SAMD15Q9P1V8 674 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 SLC12A4Q9UP95 1085 aa16.75■□□□□ 0.27
PTPN5-201ENST00000358540 SMNDC1O75940 238 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 HMGCRP04035 888 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 PDGFRAP16234 1089 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 RIPK1Q13546 671 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF268Q14587 947 aaPredicted RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 MFSD10Q14728 455 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 SCYL2Q6P3W7 929 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 TRPM8Q7Z2W7 1104 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 TTC30AQ86WT1 665 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CCHCR1Q8TD31 782 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 LRRN4Q8WUT4 740 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 MCRS1Q96EZ8 462 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 SNX27Q96L92 541 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 USP18Q9UMW8 372 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 STK38LQ9Y2H1 464 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CITO14578 2027 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 RNF8O76064 485 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 HOXD8P13378 290 aaPredicted RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 INCA1Q0VD86 236 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF618Q5T7W0 954 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CST9Q5W186 159 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 EXOC3L1Q86VI1 746 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 ABCF3Q9NUQ8 709 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CPSF2Q9P2I0 782 aaKnown RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 SLC15A5A6NIM6 579 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms